Gene : Cagra.2192s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31989:SF4 - NAC DOMAIN-CONTAINING PROTEIN 61-RELATED Genomic Order:  6
Name:  ? Cagra.2192s0006 Secondary Identifier:  ? PAC:28907226
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2192s0006 0.5kb upstream 0.5kb upstream 2458 true Scaffold2192: 28285-30742 Capsella grandiflora
Cagra.2192s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2192: 30243-30742 Capsella grandiflora
Cagra.2192s0006 0.5kb downstream 0.5kb downstream 2458 true Scaffold2192: 27785-30242 Capsella grandiflora
Cagra.2192s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2192: 27785-28284 Capsella grandiflora
Cagra.2192s0006 1.0kb upstream 1.0kb upstream 2958 true Scaffold2192: 28285-31242 Capsella grandiflora
Cagra.2192s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2192: 30243-31242 Capsella grandiflora
Cagra.2192s0006 1.0kb downstream 1.0kb downstream 2958 true Scaffold2192: 27285-30242 Capsella grandiflora
Cagra.2192s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2192: 27285-28284 Capsella grandiflora
Cagra.2192s0006 2.0kb upstream 2.0kb upstream 3958 true Scaffold2192: 28285-32242 Capsella grandiflora
Cagra.2192s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2192: 30243-32242 Capsella grandiflora
Cagra.2192s0006 2.0kb downstream 2.0kb downstream 3958 true Scaffold2192: 26285-30242 Capsella grandiflora
Cagra.2192s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2192: 26285-28284 Capsella grandiflora
Cagra.2192s0006 5.0kb upstream 5.0kb upstream 6958 true Scaffold2192: 28285-35242 Capsella grandiflora
Cagra.2192s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2192: 30243-35242 Capsella grandiflora
Cagra.2192s0006 5.0kb downstream 5.0kb downstream 6958 true Scaffold2192: 23285-30242 Capsella grandiflora
Cagra.2192s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2192: 23285-28284 Capsella grandiflora
Cagra.2192s0006 10.0kb upstream 10.0kb upstream 11958 true Scaffold2192: 28285-40242 Capsella grandiflora
Cagra.2192s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2192: 30243-40242 Capsella grandiflora
Cagra.2192s0006 10.0kb downstream 10.0kb downstream 11958 true Scaffold2192: 18285-30242 Capsella grandiflora
Cagra.2192s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2192: 18285-28284 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365187 5261 Brassicaceae View MSA
123839426 5264 Brassicales-Malvales View MSA
124346056 5266 SBM View MSA
124246448 5268 Malvidae View MSA
124064044 5270 Rosid View MSA
123746448 5271 Pentapetalae View MSA
122785794 5272 Eudicot View MSA
122050248 5273 Angiosperm View MSA
121311822 5274 Embryophyte View MSA
123349064 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain