Gene : Cagra.2197s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13169:SF3 - MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 Genomic Order:  8
Name:  ? Cagra.2197s0008 Secondary Identifier:  ? PAC:28899652
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2197s0008 0.5kb upstream 0.5kb upstream 2555 true Scaffold2197: 27159-29713 Capsella grandiflora
Cagra.2197s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold2197: 27159-27658 Capsella grandiflora
Cagra.2197s0008 0.5kb downstream 0.5kb downstream 2555 true Scaffold2197: 27659-30213 Capsella grandiflora
Cagra.2197s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold2197: 29714-30213 Capsella grandiflora
Cagra.2197s0008 1.0kb upstream 1.0kb upstream 3055 true Scaffold2197: 26659-29713 Capsella grandiflora
Cagra.2197s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold2197: 26659-27658 Capsella grandiflora
Cagra.2197s0008 1.0kb downstream 1.0kb downstream 3055 true Scaffold2197: 27659-30713 Capsella grandiflora
Cagra.2197s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold2197: 29714-30713 Capsella grandiflora
Cagra.2197s0008 2.0kb upstream 2.0kb upstream 4055 true Scaffold2197: 25659-29713 Capsella grandiflora
Cagra.2197s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold2197: 25659-27658 Capsella grandiflora
Cagra.2197s0008 2.0kb downstream 2.0kb downstream 4055 true Scaffold2197: 27659-31713 Capsella grandiflora
Cagra.2197s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold2197: 29714-31713 Capsella grandiflora
Cagra.2197s0008 5.0kb upstream 5.0kb upstream 7055 true Scaffold2197: 22659-29713 Capsella grandiflora
Cagra.2197s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold2197: 22659-27658 Capsella grandiflora
Cagra.2197s0008 5.0kb downstream 5.0kb downstream 7055 true Scaffold2197: 27659-34713 Capsella grandiflora
Cagra.2197s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold2197: 29714-34713 Capsella grandiflora
Cagra.2197s0008 10.0kb upstream 10.0kb upstream 12055 true Scaffold2197: 17659-29713 Capsella grandiflora
Cagra.2197s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold2197: 17659-27658 Capsella grandiflora
Cagra.2197s0008 10.0kb downstream 10.0kb downstream 12055 true Scaffold2197: 27659-39713 Capsella grandiflora
Cagra.2197s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold2197: 29714-39713 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378654 5261 Brassicaceae View MSA
123831940 5264 Brassicales-Malvales View MSA
124345641 5266 SBM View MSA
124248772 5268 Malvidae View MSA
124067947 5270 Rosid View MSA
123739636 5271 Pentapetalae View MSA
122787599 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain