Gene : Cagra.2175s0017 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19241//PTHR19241:SF271 - ATP-BINDING CASSETTE TRANSPORTER Genomic Order:  17
Name:  ? Cagra.2175s0017 Secondary Identifier:  ? PAC:28895782
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2175s0017 0.5kb upstream 0.5kb upstream 4758 true Scaffold2175: 68071-72828 Capsella grandiflora
Cagra.2175s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold2175: 68071-68570 Capsella grandiflora
Cagra.2175s0017 0.5kb downstream 0.5kb downstream 4758 true Scaffold2175: 68571-73328 Capsella grandiflora
Cagra.2175s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold2175: 72829-73328 Capsella grandiflora
Cagra.2175s0017 1.0kb upstream 1.0kb upstream 5258 true Scaffold2175: 67571-72828 Capsella grandiflora
Cagra.2175s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold2175: 67571-68570 Capsella grandiflora
Cagra.2175s0017 1.0kb downstream 1.0kb downstream 5258 true Scaffold2175: 68571-73828 Capsella grandiflora
Cagra.2175s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold2175: 72829-73828 Capsella grandiflora
Cagra.2175s0017 2.0kb upstream 2.0kb upstream 6258 true Scaffold2175: 66571-72828 Capsella grandiflora
Cagra.2175s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold2175: 66571-68570 Capsella grandiflora
Cagra.2175s0017 2.0kb downstream 2.0kb downstream 6258 true Scaffold2175: 68571-74828 Capsella grandiflora
Cagra.2175s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold2175: 72829-74828 Capsella grandiflora
Cagra.2175s0017 5.0kb upstream 5.0kb upstream 9258 true Scaffold2175: 63571-72828 Capsella grandiflora
Cagra.2175s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold2175: 63571-68570 Capsella grandiflora
Cagra.2175s0017 5.0kb downstream 5.0kb downstream 9258 true Scaffold2175: 68571-77828 Capsella grandiflora
Cagra.2175s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold2175: 72829-77828 Capsella grandiflora
Cagra.2175s0017 10.0kb upstream 10.0kb upstream 14258 true Scaffold2175: 58571-72828 Capsella grandiflora
Cagra.2175s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold2175: 58571-68570 Capsella grandiflora
Cagra.2175s0017 10.0kb downstream 10.0kb downstream 14258 true Scaffold2175: 68571-82828 Capsella grandiflora
Cagra.2175s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold2175: 72829-82828 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376931 5261 Brassicaceae View MSA
123829870 5264 Brassicales-Malvales View MSA
124343480 5266 SBM View MSA
124251010 5268 Malvidae View MSA
124066296 5270 Rosid View MSA
123736710 5271 Pentapetalae View MSA
122788967 5272 Eudicot View MSA
122051259 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain