Gene : Cagra.2175s0014 C. grandiflora v1.1
Defline:  (1 of 2) PTHR19139:SF30 - AQUAPORIN TIP3-1-RELATED Genomic Order:  14
Name:  ? Cagra.2175s0014 Secondary Identifier:  ? PAC:28895784
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2175s0014 0.5kb upstream 0.5kb upstream 1730 true Scaffold2175: 57207-58936 Capsella grandiflora
Cagra.2175s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold2175: 57207-57706 Capsella grandiflora
Cagra.2175s0014 0.5kb downstream 0.5kb downstream 1730 true Scaffold2175: 57707-59436 Capsella grandiflora
Cagra.2175s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold2175: 58937-59436 Capsella grandiflora
Cagra.2175s0014 1.0kb upstream 1.0kb upstream 2230 true Scaffold2175: 56707-58936 Capsella grandiflora
Cagra.2175s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold2175: 56707-57706 Capsella grandiflora
Cagra.2175s0014 1.0kb downstream 1.0kb downstream 2230 true Scaffold2175: 57707-59936 Capsella grandiflora
Cagra.2175s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold2175: 58937-59936 Capsella grandiflora
Cagra.2175s0014 2.0kb upstream 2.0kb upstream 3230 true Scaffold2175: 55707-58936 Capsella grandiflora
Cagra.2175s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold2175: 55707-57706 Capsella grandiflora
Cagra.2175s0014 2.0kb downstream 2.0kb downstream 3230 true Scaffold2175: 57707-60936 Capsella grandiflora
Cagra.2175s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold2175: 58937-60936 Capsella grandiflora
Cagra.2175s0014 5.0kb upstream 5.0kb upstream 6230 true Scaffold2175: 52707-58936 Capsella grandiflora
Cagra.2175s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold2175: 52707-57706 Capsella grandiflora
Cagra.2175s0014 5.0kb downstream 5.0kb downstream 6230 true Scaffold2175: 57707-63936 Capsella grandiflora
Cagra.2175s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold2175: 58937-63936 Capsella grandiflora
Cagra.2175s0014 10.0kb upstream 10.0kb upstream 11230 true Scaffold2175: 47707-58936 Capsella grandiflora
Cagra.2175s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold2175: 47707-57706 Capsella grandiflora
Cagra.2175s0014 10.0kb downstream 10.0kb downstream 11230 true Scaffold2175: 57707-68936 Capsella grandiflora
Cagra.2175s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold2175: 58937-68936 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374013 5261 Brassicaceae View MSA
123838510 5264 Brassicales-Malvales View MSA
124344483 5266 SBM View MSA
124244047 5268 Malvidae View MSA
124064824 5270 Rosid View MSA
123744186 5271 Pentapetalae View MSA
122786235 5272 Eudicot View MSA
122044234 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain