Gene : Cagra.2175s0035 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23115//PTHR23115:SF133 - TRANSLATION FACTOR Genomic Order:  35
Name:  ? Cagra.2175s0035 Secondary Identifier:  ? PAC:28895795
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2175s0035 0.5kb upstream 0.5kb upstream 2669 true Scaffold2175: 128039-130707 Capsella grandiflora
Cagra.2175s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold2175: 130208-130707 Capsella grandiflora
Cagra.2175s0035 0.5kb downstream 0.5kb downstream 2669 true Scaffold2175: 127539-130207 Capsella grandiflora
Cagra.2175s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold2175: 127539-128038 Capsella grandiflora
Cagra.2175s0035 1.0kb upstream 1.0kb upstream 3169 true Scaffold2175: 128039-131207 Capsella grandiflora
Cagra.2175s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold2175: 130208-131207 Capsella grandiflora
Cagra.2175s0035 1.0kb downstream 1.0kb downstream 3169 true Scaffold2175: 127039-130207 Capsella grandiflora
Cagra.2175s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold2175: 127039-128038 Capsella grandiflora
Cagra.2175s0035 2.0kb upstream 2.0kb upstream 4169 true Scaffold2175: 128039-132207 Capsella grandiflora
Cagra.2175s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold2175: 130208-132207 Capsella grandiflora
Cagra.2175s0035 2.0kb downstream 2.0kb downstream 4169 true Scaffold2175: 126039-130207 Capsella grandiflora
Cagra.2175s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold2175: 126039-128038 Capsella grandiflora
Cagra.2175s0035 5.0kb upstream 5.0kb upstream 7169 true Scaffold2175: 128039-135207 Capsella grandiflora
Cagra.2175s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold2175: 130208-135207 Capsella grandiflora
Cagra.2175s0035 5.0kb downstream 5.0kb downstream 7169 true Scaffold2175: 123039-130207 Capsella grandiflora
Cagra.2175s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold2175: 123039-128038 Capsella grandiflora
Cagra.2175s0035 10.0kb upstream 10.0kb upstream 12169 true Scaffold2175: 128039-140207 Capsella grandiflora
Cagra.2175s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold2175: 130208-140207 Capsella grandiflora
Cagra.2175s0035 10.0kb downstream 10.0kb downstream 12169 true Scaffold2175: 118039-130207 Capsella grandiflora
Cagra.2175s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold2175: 118039-128038 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333101 5261 Brassicaceae Singleton cluster - no MSA
123841961 5264 Brassicales-Malvales View MSA
124323148 5266 SBM View MSA
124250876 5268 Malvidae View MSA
124050745 5270 Rosid View MSA
123749616 5271 Pentapetalae View MSA
122773228 5272 Eudicot View MSA
122049115 5273 Angiosperm View MSA
121350954 5274 Embryophyte View MSA
123423923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain