Gene : Cagra.2179s0009 C. grandiflora v1.1
Genomic Order:  9 Name:  ? Cagra.2179s0009
Secondary Identifier:  ? PAC:28918675
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2179s0009 0.5kb upstream 0.5kb upstream 1749 true Scaffold2179: 21144-22892 Capsella grandiflora
Cagra.2179s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 22393-22892 Capsella grandiflora
Cagra.2179s0009 0.5kb downstream 0.5kb downstream 1749 true Scaffold2179: 20644-22392 Capsella grandiflora
Cagra.2179s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 20644-21143 Capsella grandiflora
Cagra.2179s0009 1.0kb upstream 1.0kb upstream 2249 true Scaffold2179: 21144-23392 Capsella grandiflora
Cagra.2179s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 22393-23392 Capsella grandiflora
Cagra.2179s0009 1.0kb downstream 1.0kb downstream 2249 true Scaffold2179: 20144-22392 Capsella grandiflora
Cagra.2179s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 20144-21143 Capsella grandiflora
Cagra.2179s0009 2.0kb upstream 2.0kb upstream 3249 true Scaffold2179: 21144-24392 Capsella grandiflora
Cagra.2179s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 22393-24392 Capsella grandiflora
Cagra.2179s0009 2.0kb downstream 2.0kb downstream 3249 true Scaffold2179: 19144-22392 Capsella grandiflora
Cagra.2179s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 19144-21143 Capsella grandiflora
Cagra.2179s0009 5.0kb upstream 5.0kb upstream 6249 true Scaffold2179: 21144-27392 Capsella grandiflora
Cagra.2179s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 22393-27392 Capsella grandiflora
Cagra.2179s0009 5.0kb downstream 5.0kb downstream 6249 true Scaffold2179: 16144-22392 Capsella grandiflora
Cagra.2179s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold2179: 16144-21143 Capsella grandiflora
Cagra.2179s0009 10.0kb upstream 10.0kb upstream 11249 true Scaffold2179: 21144-32392 Capsella grandiflora
Cagra.2179s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold2179: 22393-32392 Capsella grandiflora
Cagra.2179s0009 10.0kb downstream 10.0kb downstream 11249 true Scaffold2179: 11144-22392 Capsella grandiflora
Cagra.2179s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold2179: 11144-21143 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343680 5261 Brassicaceae View MSA
123783803 5264 Brassicales-Malvales View MSA
124282016 5266 SBM View MSA
124136679 5268 Malvidae View MSA
124070954 5270 Rosid View MSA
123752761 5271 Pentapetalae View MSA
122774770 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain