Gene : Cagra.2179s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12817 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B Genomic Order:  12
Name:  ? Cagra.2179s0012 Secondary Identifier:  ? PAC:28918667
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2179s0012 0.5kb upstream 0.5kb upstream 2421 true Scaffold2179: 31461-33881 Capsella grandiflora
Cagra.2179s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 33382-33881 Capsella grandiflora
Cagra.2179s0012 0.5kb downstream 0.5kb downstream 2421 true Scaffold2179: 30961-33381 Capsella grandiflora
Cagra.2179s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 30961-31460 Capsella grandiflora
Cagra.2179s0012 1.0kb upstream 1.0kb upstream 2921 true Scaffold2179: 31461-34381 Capsella grandiflora
Cagra.2179s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 33382-34381 Capsella grandiflora
Cagra.2179s0012 1.0kb downstream 1.0kb downstream 2921 true Scaffold2179: 30461-33381 Capsella grandiflora
Cagra.2179s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 30461-31460 Capsella grandiflora
Cagra.2179s0012 2.0kb upstream 2.0kb upstream 3921 true Scaffold2179: 31461-35381 Capsella grandiflora
Cagra.2179s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 33382-35381 Capsella grandiflora
Cagra.2179s0012 2.0kb downstream 2.0kb downstream 3921 true Scaffold2179: 29461-33381 Capsella grandiflora
Cagra.2179s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 29461-31460 Capsella grandiflora
Cagra.2179s0012 5.0kb upstream 5.0kb upstream 6921 true Scaffold2179: 31461-38381 Capsella grandiflora
Cagra.2179s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 33382-38381 Capsella grandiflora
Cagra.2179s0012 5.0kb downstream 5.0kb downstream 6921 true Scaffold2179: 26461-33381 Capsella grandiflora
Cagra.2179s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold2179: 26461-31460 Capsella grandiflora
Cagra.2179s0012 10.0kb upstream 10.0kb upstream 11921 true Scaffold2179: 31461-43381 Capsella grandiflora
Cagra.2179s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold2179: 33382-43381 Capsella grandiflora
Cagra.2179s0012 10.0kb downstream 10.0kb downstream 11921 true Scaffold2179: 21461-33381 Capsella grandiflora
Cagra.2179s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold2179: 21461-31460 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367353 5261 Brassicaceae View MSA
123830972 5264 Brassicales-Malvales View MSA
124342880 5266 SBM View MSA
124237330 5268 Malvidae View MSA
124063659 5270 Rosid View MSA
123746706 5271 Pentapetalae View MSA
122792651 5272 Eudicot View MSA
122041714 5273 Angiosperm View MSA
123428891 5275 Viridiplantae View MSA
121346428 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain