Gene : Cagra.2179s0005 C. grandiflora v1.1
Defline:  (1 of 2) PF02810 - SEC-C motif (SEC-C) Genomic Order:  5
Name:  ? Cagra.2179s0005 Secondary Identifier:  ? PAC:28918699
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2179s0005 0.5kb upstream 0.5kb upstream 2192 true Scaffold2179: 7582-9773 Capsella grandiflora
Cagra.2179s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 7582-8081 Capsella grandiflora
Cagra.2179s0005 0.5kb downstream 0.5kb downstream 2192 true Scaffold2179: 8082-10273 Capsella grandiflora
Cagra.2179s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 9774-10273 Capsella grandiflora
Cagra.2179s0005 1.0kb upstream 1.0kb upstream 2692 true Scaffold2179: 7082-9773 Capsella grandiflora
Cagra.2179s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 7082-8081 Capsella grandiflora
Cagra.2179s0005 1.0kb downstream 1.0kb downstream 2692 true Scaffold2179: 8082-10773 Capsella grandiflora
Cagra.2179s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 9774-10773 Capsella grandiflora
Cagra.2179s0005 2.0kb upstream 2.0kb upstream 3692 true Scaffold2179: 6082-9773 Capsella grandiflora
Cagra.2179s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 6082-8081 Capsella grandiflora
Cagra.2179s0005 2.0kb downstream 2.0kb downstream 3692 true Scaffold2179: 8082-11773 Capsella grandiflora
Cagra.2179s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 9774-11773 Capsella grandiflora
Cagra.2179s0005 5.0kb upstream 5.0kb upstream 6692 true Scaffold2179: 3082-9773 Capsella grandiflora
Cagra.2179s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 3082-8081 Capsella grandiflora
Cagra.2179s0005 5.0kb downstream 5.0kb downstream 6692 true Scaffold2179: 8082-14773 Capsella grandiflora
Cagra.2179s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2179: 9774-14773 Capsella grandiflora
Cagra.2179s0005 10.0kb upstream 10.0kb upstream 9773 true Scaffold2179: 1-9773 Capsella grandiflora
Cagra.2179s0005 10.0kb upstream 10.0kb upstream 8081 false Scaffold2179: 1-8081 Capsella grandiflora
Cagra.2179s0005 10.0kb downstream 10.0kb downstream 11692 true Scaffold2179: 8082-19773 Capsella grandiflora
Cagra.2179s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2179: 9774-19773 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361757 5261 Brassicaceae View MSA
123833137 5264 Brassicales-Malvales View MSA
124338044 5266 SBM View MSA
124240780 5268 Malvidae View MSA
124067715 5270 Rosid View MSA
123737738 5271 Pentapetalae View MSA
122786470 5272 Eudicot View MSA
122045025 5273 Angiosperm View MSA
121346547 5274 Embryophyte View MSA
123380401 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain