Gene : Cagra.2179s0006 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10825:SF30 - T12H1.7 PROTEIN Genomic Order:  6
Name:  ? Cagra.2179s0006 Secondary Identifier:  ? PAC:28918673
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2179s0006 0.5kb upstream 0.5kb upstream 2657 true Scaffold2179: 9724-12380 Capsella grandiflora
Cagra.2179s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 9724-10223 Capsella grandiflora
Cagra.2179s0006 0.5kb downstream 0.5kb downstream 2657 true Scaffold2179: 10224-12880 Capsella grandiflora
Cagra.2179s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 12381-12880 Capsella grandiflora
Cagra.2179s0006 1.0kb upstream 1.0kb upstream 3157 true Scaffold2179: 9224-12380 Capsella grandiflora
Cagra.2179s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 9224-10223 Capsella grandiflora
Cagra.2179s0006 1.0kb downstream 1.0kb downstream 3157 true Scaffold2179: 10224-13380 Capsella grandiflora
Cagra.2179s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 12381-13380 Capsella grandiflora
Cagra.2179s0006 2.0kb upstream 2.0kb upstream 4157 true Scaffold2179: 8224-12380 Capsella grandiflora
Cagra.2179s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 8224-10223 Capsella grandiflora
Cagra.2179s0006 2.0kb downstream 2.0kb downstream 4157 true Scaffold2179: 10224-14380 Capsella grandiflora
Cagra.2179s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 12381-14380 Capsella grandiflora
Cagra.2179s0006 5.0kb upstream 5.0kb upstream 7157 true Scaffold2179: 5224-12380 Capsella grandiflora
Cagra.2179s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 5224-10223 Capsella grandiflora
Cagra.2179s0006 5.0kb downstream 5.0kb downstream 7157 true Scaffold2179: 10224-17380 Capsella grandiflora
Cagra.2179s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2179: 12381-17380 Capsella grandiflora
Cagra.2179s0006 10.0kb upstream 10.0kb upstream 12157 true Scaffold2179: 224-12380 Capsella grandiflora
Cagra.2179s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2179: 224-10223 Capsella grandiflora
Cagra.2179s0006 10.0kb downstream 10.0kb downstream 12157 true Scaffold2179: 10224-22380 Capsella grandiflora
Cagra.2179s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2179: 12381-22380 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380947 5261 Brassicaceae View MSA
123802982 5264 Brassicales-Malvales View MSA
124300126 5266 SBM View MSA
124151383 5268 Malvidae View MSA
124068520 5270 Rosid View MSA
123753293 5271 Pentapetalae View MSA
122794743 5272 Eudicot View MSA
122049409 5273 Angiosperm View MSA
121311385 5274 Embryophyte View MSA
123348689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain