Gene : Cagra.2179s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12961 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 Genomic Order:  17
Name:  ? Cagra.2179s0017 Secondary Identifier:  ? PAC:28918651
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2179s0017 0.5kb upstream 0.5kb upstream 5238 true Scaffold2179: 50736-55973 Capsella grandiflora
Cagra.2179s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 50736-51235 Capsella grandiflora
Cagra.2179s0017 0.5kb downstream 0.5kb downstream 5238 true Scaffold2179: 51236-56473 Capsella grandiflora
Cagra.2179s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 55974-56473 Capsella grandiflora
Cagra.2179s0017 1.0kb upstream 1.0kb upstream 5738 true Scaffold2179: 50236-55973 Capsella grandiflora
Cagra.2179s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 50236-51235 Capsella grandiflora
Cagra.2179s0017 1.0kb downstream 1.0kb downstream 5738 true Scaffold2179: 51236-56973 Capsella grandiflora
Cagra.2179s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 55974-56973 Capsella grandiflora
Cagra.2179s0017 2.0kb upstream 2.0kb upstream 6738 true Scaffold2179: 49236-55973 Capsella grandiflora
Cagra.2179s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 49236-51235 Capsella grandiflora
Cagra.2179s0017 2.0kb downstream 2.0kb downstream 6738 true Scaffold2179: 51236-57973 Capsella grandiflora
Cagra.2179s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 55974-57973 Capsella grandiflora
Cagra.2179s0017 5.0kb upstream 5.0kb upstream 9738 true Scaffold2179: 46236-55973 Capsella grandiflora
Cagra.2179s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 46236-51235 Capsella grandiflora
Cagra.2179s0017 5.0kb downstream 5.0kb downstream 9738 true Scaffold2179: 51236-60973 Capsella grandiflora
Cagra.2179s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold2179: 55974-60973 Capsella grandiflora
Cagra.2179s0017 10.0kb upstream 10.0kb upstream 14738 true Scaffold2179: 41236-55973 Capsella grandiflora
Cagra.2179s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold2179: 41236-51235 Capsella grandiflora
Cagra.2179s0017 10.0kb downstream 10.0kb downstream 14738 true Scaffold2179: 51236-65973 Capsella grandiflora
Cagra.2179s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold2179: 55974-65973 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499491 5273 Angiosperm View MSA
122338164 5261 Brassicaceae View MSA
123778776 5264 Brassicales-Malvales View MSA
124277115 5266 SBM View MSA
124132346 5268 Malvidae View MSA
123860659 5270 Rosid View MSA
123446261 5271 Pentapetalae View MSA
122481814 5272 Eudicot View MSA
120772830 5274 Embryophyte View MSA
123428033 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain