Gene : Cagra.2179s0020 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10894:SF1 - PROTEIN NOL-5 Genomic Order:  20
Name:  ? Cagra.2179s0020 Secondary Identifier:  ? PAC:28918687
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2179s0020 0.5kb upstream 0.5kb upstream 3566 true Scaffold2179: 68363-71928 Capsella grandiflora
Cagra.2179s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 71429-71928 Capsella grandiflora
Cagra.2179s0020 0.5kb downstream 0.5kb downstream 3566 true Scaffold2179: 67863-71428 Capsella grandiflora
Cagra.2179s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 67863-68362 Capsella grandiflora
Cagra.2179s0020 1.0kb upstream 1.0kb upstream 4066 true Scaffold2179: 68363-72428 Capsella grandiflora
Cagra.2179s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 71429-72428 Capsella grandiflora
Cagra.2179s0020 1.0kb downstream 1.0kb downstream 4066 true Scaffold2179: 67363-71428 Capsella grandiflora
Cagra.2179s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 67363-68362 Capsella grandiflora
Cagra.2179s0020 2.0kb upstream 2.0kb upstream 5066 true Scaffold2179: 68363-73428 Capsella grandiflora
Cagra.2179s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 71429-73428 Capsella grandiflora
Cagra.2179s0020 2.0kb downstream 2.0kb downstream 5066 true Scaffold2179: 66363-71428 Capsella grandiflora
Cagra.2179s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 66363-68362 Capsella grandiflora
Cagra.2179s0020 5.0kb upstream 5.0kb upstream 8066 true Scaffold2179: 68363-76428 Capsella grandiflora
Cagra.2179s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 71429-76428 Capsella grandiflora
Cagra.2179s0020 5.0kb downstream 5.0kb downstream 8066 true Scaffold2179: 63363-71428 Capsella grandiflora
Cagra.2179s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold2179: 63363-68362 Capsella grandiflora
Cagra.2179s0020 10.0kb upstream 10.0kb upstream 13066 true Scaffold2179: 68363-81428 Capsella grandiflora
Cagra.2179s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold2179: 71429-81428 Capsella grandiflora
Cagra.2179s0020 10.0kb downstream 10.0kb downstream 13066 true Scaffold2179: 58363-71428 Capsella grandiflora
Cagra.2179s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold2179: 58363-68362 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041003 5273 Angiosperm View MSA
122377223 5261 Brassicaceae View MSA
123835230 5264 Brassicales-Malvales View MSA
124348847 5266 SBM View MSA
124242284 5268 Malvidae View MSA
124068125 5270 Rosid View MSA
123744603 5271 Pentapetalae View MSA
122786975 5272 Eudicot View MSA
121345420 5274 Embryophyte View MSA
123426153 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain