Gene : Cagra.2213s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10799:SF705 - SNF2 , HELICASE AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  5
Name:  ? Cagra.2213s0005 Secondary Identifier:  ? PAC:28917228
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2213s0005 0.5kb upstream 0.5kb upstream 6673 true Scaffold2213: 30784-37456 Capsella grandiflora
Cagra.2213s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2213: 36957-37456 Capsella grandiflora
Cagra.2213s0005 0.5kb downstream 0.5kb downstream 6673 true Scaffold2213: 30284-36956 Capsella grandiflora
Cagra.2213s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2213: 30284-30783 Capsella grandiflora
Cagra.2213s0005 1.0kb upstream 1.0kb upstream 7173 true Scaffold2213: 30784-37956 Capsella grandiflora
Cagra.2213s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2213: 36957-37956 Capsella grandiflora
Cagra.2213s0005 1.0kb downstream 1.0kb downstream 7173 true Scaffold2213: 29784-36956 Capsella grandiflora
Cagra.2213s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2213: 29784-30783 Capsella grandiflora
Cagra.2213s0005 2.0kb upstream 2.0kb upstream 8173 true Scaffold2213: 30784-38956 Capsella grandiflora
Cagra.2213s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2213: 36957-38956 Capsella grandiflora
Cagra.2213s0005 2.0kb downstream 2.0kb downstream 8173 true Scaffold2213: 28784-36956 Capsella grandiflora
Cagra.2213s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2213: 28784-30783 Capsella grandiflora
Cagra.2213s0005 5.0kb upstream 5.0kb upstream 11173 true Scaffold2213: 30784-41956 Capsella grandiflora
Cagra.2213s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2213: 36957-41956 Capsella grandiflora
Cagra.2213s0005 5.0kb downstream 5.0kb downstream 11173 true Scaffold2213: 25784-36956 Capsella grandiflora
Cagra.2213s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2213: 25784-30783 Capsella grandiflora
Cagra.2213s0005 10.0kb upstream 10.0kb upstream 14851 true Scaffold2213: 30784-45634 Capsella grandiflora
Cagra.2213s0005 10.0kb upstream 10.0kb upstream 8678 false Scaffold2213: 36957-45634 Capsella grandiflora
Cagra.2213s0005 10.0kb downstream 10.0kb downstream 16173 true Scaffold2213: 20784-36956 Capsella grandiflora
Cagra.2213s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2213: 20784-30783 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376434 5261 Brassicaceae View MSA
123835983 5264 Brassicales-Malvales View MSA
124341082 5266 SBM View MSA
124253553 5268 Malvidae View MSA
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain