Gene : Cagra.2171s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23176:SF42 - RHO GTPASE-ACTIVATING PROTEIN REN1 Genomic Order:  3
Name:  ? Cagra.2171s0003 Secondary Identifier:  ? PAC:28898645
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2171s0003 0.5kb upstream 0.5kb upstream 7941 true Scaffold2171: 7100-15040 Capsella grandiflora
Cagra.2171s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2171: 7100-7599 Capsella grandiflora
Cagra.2171s0003 0.5kb downstream 0.5kb downstream 7941 true Scaffold2171: 7600-15540 Capsella grandiflora
Cagra.2171s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2171: 15041-15540 Capsella grandiflora
Cagra.2171s0003 1.0kb upstream 1.0kb upstream 8441 true Scaffold2171: 6600-15040 Capsella grandiflora
Cagra.2171s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2171: 6600-7599 Capsella grandiflora
Cagra.2171s0003 1.0kb downstream 1.0kb downstream 8441 true Scaffold2171: 7600-16040 Capsella grandiflora
Cagra.2171s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2171: 15041-16040 Capsella grandiflora
Cagra.2171s0003 2.0kb upstream 2.0kb upstream 9441 true Scaffold2171: 5600-15040 Capsella grandiflora
Cagra.2171s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2171: 5600-7599 Capsella grandiflora
Cagra.2171s0003 2.0kb downstream 2.0kb downstream 9441 true Scaffold2171: 7600-17040 Capsella grandiflora
Cagra.2171s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2171: 15041-17040 Capsella grandiflora
Cagra.2171s0003 5.0kb upstream 5.0kb upstream 12441 true Scaffold2171: 2600-15040 Capsella grandiflora
Cagra.2171s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2171: 2600-7599 Capsella grandiflora
Cagra.2171s0003 5.0kb downstream 5.0kb downstream 12441 true Scaffold2171: 7600-20040 Capsella grandiflora
Cagra.2171s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2171: 15041-20040 Capsella grandiflora
Cagra.2171s0003 10.0kb upstream 10.0kb upstream 15040 true Scaffold2171: 1-15040 Capsella grandiflora
Cagra.2171s0003 10.0kb upstream 10.0kb upstream 7599 false Scaffold2171: 1-7599 Capsella grandiflora
Cagra.2171s0003 10.0kb downstream 10.0kb downstream 17441 true Scaffold2171: 7600-25040 Capsella grandiflora
Cagra.2171s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2171: 15041-25040 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375408 5261 Brassicaceae View MSA
123835300 5264 Brassicales-Malvales View MSA
124343934 5266 SBM View MSA
124252587 5268 Malvidae View MSA
124067310 5270 Rosid View MSA
123749156 5271 Pentapetalae View MSA
122794752 5272 Eudicot View MSA
122042223 5273 Angiosperm View MSA
121347338 5274 Embryophyte View MSA
123380531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain