Gene : Cagra.2171s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Genomic Order:  7
Name:  ? Cagra.2171s0007 Secondary Identifier:  ? PAC:28898642
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2171s0007 0.5kb upstream 0.5kb upstream 3669 true Scaffold2171: 27864-31532 Capsella grandiflora
Cagra.2171s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold2171: 27864-28363 Capsella grandiflora
Cagra.2171s0007 0.5kb downstream 0.5kb downstream 3669 true Scaffold2171: 28364-32032 Capsella grandiflora
Cagra.2171s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold2171: 31533-32032 Capsella grandiflora
Cagra.2171s0007 1.0kb upstream 1.0kb upstream 4169 true Scaffold2171: 27364-31532 Capsella grandiflora
Cagra.2171s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold2171: 27364-28363 Capsella grandiflora
Cagra.2171s0007 1.0kb downstream 1.0kb downstream 4169 true Scaffold2171: 28364-32532 Capsella grandiflora
Cagra.2171s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold2171: 31533-32532 Capsella grandiflora
Cagra.2171s0007 2.0kb upstream 2.0kb upstream 5169 true Scaffold2171: 26364-31532 Capsella grandiflora
Cagra.2171s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold2171: 26364-28363 Capsella grandiflora
Cagra.2171s0007 2.0kb downstream 2.0kb downstream 5169 true Scaffold2171: 28364-33532 Capsella grandiflora
Cagra.2171s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold2171: 31533-33532 Capsella grandiflora
Cagra.2171s0007 5.0kb upstream 5.0kb upstream 8169 true Scaffold2171: 23364-31532 Capsella grandiflora
Cagra.2171s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold2171: 23364-28363 Capsella grandiflora
Cagra.2171s0007 5.0kb downstream 5.0kb downstream 8169 true Scaffold2171: 28364-36532 Capsella grandiflora
Cagra.2171s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold2171: 31533-36532 Capsella grandiflora
Cagra.2171s0007 10.0kb upstream 10.0kb upstream 13169 true Scaffold2171: 18364-31532 Capsella grandiflora
Cagra.2171s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold2171: 18364-28363 Capsella grandiflora
Cagra.2171s0007 10.0kb downstream 10.0kb downstream 13169 true Scaffold2171: 28364-41532 Capsella grandiflora
Cagra.2171s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold2171: 31533-41532 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362813 5261 Brassicaceae View MSA
123834976 5264 Brassicales-Malvales View MSA
124321983 5266 SBM View MSA
124247204 5268 Malvidae View MSA
124071999 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain