Gene : Cagra.2468s0008 C. grandiflora v1.1
Defline:  (1 of 47) PF00892 - EamA-like transporter family (EamA) Genomic Order:  8
Name:  ? Cagra.2468s0008 Secondary Identifier:  ? PAC:28895588
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2468s0008 0.5kb upstream 0.5kb upstream 2487 true Scaffold2468: 30864-33350 Capsella grandiflora
Cagra.2468s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold2468: 30864-31363 Capsella grandiflora
Cagra.2468s0008 0.5kb downstream 0.5kb downstream 2487 true Scaffold2468: 31364-33850 Capsella grandiflora
Cagra.2468s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold2468: 33351-33850 Capsella grandiflora
Cagra.2468s0008 1.0kb upstream 1.0kb upstream 2987 true Scaffold2468: 30364-33350 Capsella grandiflora
Cagra.2468s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold2468: 30364-31363 Capsella grandiflora
Cagra.2468s0008 1.0kb downstream 1.0kb downstream 2987 true Scaffold2468: 31364-34350 Capsella grandiflora
Cagra.2468s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold2468: 33351-34350 Capsella grandiflora
Cagra.2468s0008 2.0kb upstream 2.0kb upstream 3987 true Scaffold2468: 29364-33350 Capsella grandiflora
Cagra.2468s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold2468: 29364-31363 Capsella grandiflora
Cagra.2468s0008 2.0kb downstream 2.0kb downstream 3987 true Scaffold2468: 31364-35350 Capsella grandiflora
Cagra.2468s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold2468: 33351-35350 Capsella grandiflora
Cagra.2468s0008 5.0kb upstream 5.0kb upstream 6987 true Scaffold2468: 26364-33350 Capsella grandiflora
Cagra.2468s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold2468: 26364-31363 Capsella grandiflora
Cagra.2468s0008 5.0kb downstream 5.0kb downstream 6601 true Scaffold2468: 31364-37964 Capsella grandiflora
Cagra.2468s0008 5.0kb downstream 5.0kb downstream 4614 false Scaffold2468: 33351-37964 Capsella grandiflora
Cagra.2468s0008 10.0kb upstream 10.0kb upstream 11987 true Scaffold2468: 21364-33350 Capsella grandiflora
Cagra.2468s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold2468: 21364-31363 Capsella grandiflora
Cagra.2468s0008 10.0kb downstream 10.0kb downstream 6601 true Scaffold2468: 31364-37964 Capsella grandiflora
Cagra.2468s0008 10.0kb downstream 10.0kb downstream 4614 false Scaffold2468: 33351-37964 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375466 5261 Brassicaceae View MSA
123840408 5264 Brassicales-Malvales View MSA
124350712 5266 SBM View MSA
124251502 5268 Malvidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain