Gene : Cagra.2471s0038 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10217:SF504 - POTASSIUM CHANNEL AKT1-RELATED Genomic Order:  38
Name:  ? Cagra.2471s0038 Secondary Identifier:  ? PAC:28915209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2471s0038 0.5kb upstream 0.5kb upstream 4603 true Scaffold2471: 142434-147036 Capsella grandiflora
Cagra.2471s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold2471: 142434-142933 Capsella grandiflora
Cagra.2471s0038 0.5kb downstream 0.5kb downstream 4603 true Scaffold2471: 142934-147536 Capsella grandiflora
Cagra.2471s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold2471: 147037-147536 Capsella grandiflora
Cagra.2471s0038 1.0kb upstream 1.0kb upstream 5103 true Scaffold2471: 141934-147036 Capsella grandiflora
Cagra.2471s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold2471: 141934-142933 Capsella grandiflora
Cagra.2471s0038 1.0kb downstream 1.0kb downstream 5103 true Scaffold2471: 142934-148036 Capsella grandiflora
Cagra.2471s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold2471: 147037-148036 Capsella grandiflora
Cagra.2471s0038 2.0kb upstream 2.0kb upstream 6103 true Scaffold2471: 140934-147036 Capsella grandiflora
Cagra.2471s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold2471: 140934-142933 Capsella grandiflora
Cagra.2471s0038 2.0kb downstream 2.0kb downstream 6103 true Scaffold2471: 142934-149036 Capsella grandiflora
Cagra.2471s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold2471: 147037-149036 Capsella grandiflora
Cagra.2471s0038 5.0kb upstream 5.0kb upstream 9103 true Scaffold2471: 137934-147036 Capsella grandiflora
Cagra.2471s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold2471: 137934-142933 Capsella grandiflora
Cagra.2471s0038 5.0kb downstream 5.0kb downstream 9103 true Scaffold2471: 142934-152036 Capsella grandiflora
Cagra.2471s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold2471: 147037-152036 Capsella grandiflora
Cagra.2471s0038 10.0kb upstream 10.0kb upstream 14103 true Scaffold2471: 132934-147036 Capsella grandiflora
Cagra.2471s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold2471: 132934-142933 Capsella grandiflora
Cagra.2471s0038 10.0kb downstream 10.0kb downstream 14103 true Scaffold2471: 142934-157036 Capsella grandiflora
Cagra.2471s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold2471: 147037-157036 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071776 5270 Rosid View MSA
122366098 5261 Brassicaceae View MSA
123799110 5264 Brassicales-Malvales View MSA
124296662 5266 SBM View MSA
124253036 5268 Malvidae View MSA
123743419 5271 Pentapetalae View MSA
122788251 5272 Eudicot View MSA
122043256 5273 Angiosperm View MSA
121350921 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain