Gene : Cagra.2471s0036 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31579:SF11 - EXPRESSED PROTEIN Genomic Order:  36
Name:  ? Cagra.2471s0036 Secondary Identifier:  ? PAC:28915167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2471s0036 0.5kb upstream 0.5kb upstream 1975 true Scaffold2471: 138508-140482 Capsella grandiflora
Cagra.2471s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold2471: 138508-139007 Capsella grandiflora
Cagra.2471s0036 0.5kb downstream 0.5kb downstream 1975 true Scaffold2471: 139008-140982 Capsella grandiflora
Cagra.2471s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold2471: 140483-140982 Capsella grandiflora
Cagra.2471s0036 1.0kb upstream 1.0kb upstream 2475 true Scaffold2471: 138008-140482 Capsella grandiflora
Cagra.2471s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold2471: 138008-139007 Capsella grandiflora
Cagra.2471s0036 1.0kb downstream 1.0kb downstream 2475 true Scaffold2471: 139008-141482 Capsella grandiflora
Cagra.2471s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold2471: 140483-141482 Capsella grandiflora
Cagra.2471s0036 2.0kb upstream 2.0kb upstream 3475 true Scaffold2471: 137008-140482 Capsella grandiflora
Cagra.2471s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold2471: 137008-139007 Capsella grandiflora
Cagra.2471s0036 2.0kb downstream 2.0kb downstream 3475 true Scaffold2471: 139008-142482 Capsella grandiflora
Cagra.2471s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold2471: 140483-142482 Capsella grandiflora
Cagra.2471s0036 5.0kb upstream 5.0kb upstream 6475 true Scaffold2471: 134008-140482 Capsella grandiflora
Cagra.2471s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold2471: 134008-139007 Capsella grandiflora
Cagra.2471s0036 5.0kb downstream 5.0kb downstream 6475 true Scaffold2471: 139008-145482 Capsella grandiflora
Cagra.2471s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold2471: 140483-145482 Capsella grandiflora
Cagra.2471s0036 10.0kb upstream 10.0kb upstream 11475 true Scaffold2471: 129008-140482 Capsella grandiflora
Cagra.2471s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold2471: 129008-139007 Capsella grandiflora
Cagra.2471s0036 10.0kb downstream 10.0kb downstream 11475 true Scaffold2471: 139008-150482 Capsella grandiflora
Cagra.2471s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold2471: 140483-150482 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373576 5261 Brassicaceae View MSA
123836127 5264 Brassicales-Malvales View MSA
124340947 5266 SBM View MSA
124246421 5268 Malvidae View MSA
124071276 5270 Rosid View MSA
123751272 5271 Pentapetalae View MSA
122785688 5272 Eudicot View MSA
122045708 5273 Angiosperm View MSA
123429021 5275 Viridiplantae View MSA
121310489 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain