Gene : Cagra.2471s0056 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24058:SF44 - SERINE/THREONINE-PROTEIN KINASE AFC1 Genomic Order:  56
Name:  ? Cagra.2471s0056 Secondary Identifier:  ? PAC:28915168
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2471s0056 0.5kb upstream 0.5kb upstream 3754 true Scaffold2471: 228099-231852 Capsella grandiflora
Cagra.2471s0056 0.5kb upstream 0.5kb upstream 500 false Scaffold2471: 228099-228598 Capsella grandiflora
Cagra.2471s0056 0.5kb downstream 0.5kb downstream 3754 true Scaffold2471: 228599-232352 Capsella grandiflora
Cagra.2471s0056 0.5kb downstream 0.5kb downstream 500 false Scaffold2471: 231853-232352 Capsella grandiflora
Cagra.2471s0056 1.0kb upstream 1.0kb upstream 4254 true Scaffold2471: 227599-231852 Capsella grandiflora
Cagra.2471s0056 1.0kb upstream 1.0kb upstream 1000 false Scaffold2471: 227599-228598 Capsella grandiflora
Cagra.2471s0056 1.0kb downstream 1.0kb downstream 4254 true Scaffold2471: 228599-232852 Capsella grandiflora
Cagra.2471s0056 1.0kb downstream 1.0kb downstream 1000 false Scaffold2471: 231853-232852 Capsella grandiflora
Cagra.2471s0056 2.0kb upstream 2.0kb upstream 5254 true Scaffold2471: 226599-231852 Capsella grandiflora
Cagra.2471s0056 2.0kb upstream 2.0kb upstream 2000 false Scaffold2471: 226599-228598 Capsella grandiflora
Cagra.2471s0056 2.0kb downstream 2.0kb downstream 5254 true Scaffold2471: 228599-233852 Capsella grandiflora
Cagra.2471s0056 2.0kb downstream 2.0kb downstream 2000 false Scaffold2471: 231853-233852 Capsella grandiflora
Cagra.2471s0056 5.0kb upstream 5.0kb upstream 8254 true Scaffold2471: 223599-231852 Capsella grandiflora
Cagra.2471s0056 5.0kb upstream 5.0kb upstream 5000 false Scaffold2471: 223599-228598 Capsella grandiflora
Cagra.2471s0056 5.0kb downstream 5.0kb downstream 8254 true Scaffold2471: 228599-236852 Capsella grandiflora
Cagra.2471s0056 5.0kb downstream 5.0kb downstream 5000 false Scaffold2471: 231853-236852 Capsella grandiflora
Cagra.2471s0056 10.0kb upstream 10.0kb upstream 13254 true Scaffold2471: 218599-231852 Capsella grandiflora
Cagra.2471s0056 10.0kb upstream 10.0kb upstream 10000 false Scaffold2471: 218599-228598 Capsella grandiflora
Cagra.2471s0056 10.0kb downstream 10.0kb downstream 13254 true Scaffold2471: 228599-241852 Capsella grandiflora
Cagra.2471s0056 10.0kb downstream 10.0kb downstream 10000 false Scaffold2471: 231853-241852 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367549 5261 Brassicaceae View MSA
123829467 5264 Brassicales-Malvales View MSA
124340495 5266 SBM View MSA
124237459 5268 Malvidae View MSA
124060771 5270 Rosid View MSA
123738736 5271 Pentapetalae View MSA
122792665 5272 Eudicot View MSA
122044731 5273 Angiosperm View MSA
121349585 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain