Gene : Cagra.2481s0004 C. grandiflora v1.1
Defline:  (1 of 4) PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Genomic Order:  4
Name:  ? Cagra.2481s0004 Secondary Identifier:  ? PAC:28918161
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2481s0004 0.5kb upstream 0.5kb upstream 4125 true Scaffold2481: 10188-14312 Capsella grandiflora
Cagra.2481s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2481: 13813-14312 Capsella grandiflora
Cagra.2481s0004 0.5kb downstream 0.5kb downstream 4125 true Scaffold2481: 9688-13812 Capsella grandiflora
Cagra.2481s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2481: 9688-10187 Capsella grandiflora
Cagra.2481s0004 1.0kb upstream 1.0kb upstream 4625 true Scaffold2481: 10188-14812 Capsella grandiflora
Cagra.2481s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2481: 13813-14812 Capsella grandiflora
Cagra.2481s0004 1.0kb downstream 1.0kb downstream 4625 true Scaffold2481: 9188-13812 Capsella grandiflora
Cagra.2481s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2481: 9188-10187 Capsella grandiflora
Cagra.2481s0004 2.0kb upstream 2.0kb upstream 5625 true Scaffold2481: 10188-15812 Capsella grandiflora
Cagra.2481s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2481: 13813-15812 Capsella grandiflora
Cagra.2481s0004 2.0kb downstream 2.0kb downstream 5625 true Scaffold2481: 8188-13812 Capsella grandiflora
Cagra.2481s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2481: 8188-10187 Capsella grandiflora
Cagra.2481s0004 5.0kb upstream 5.0kb upstream 8625 true Scaffold2481: 10188-18812 Capsella grandiflora
Cagra.2481s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2481: 13813-18812 Capsella grandiflora
Cagra.2481s0004 5.0kb downstream 5.0kb downstream 8625 true Scaffold2481: 5188-13812 Capsella grandiflora
Cagra.2481s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2481: 5188-10187 Capsella grandiflora
Cagra.2481s0004 10.0kb upstream 10.0kb upstream 13625 true Scaffold2481: 10188-23812 Capsella grandiflora
Cagra.2481s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold2481: 13813-23812 Capsella grandiflora
Cagra.2481s0004 10.0kb downstream 10.0kb downstream 13625 true Scaffold2481: 188-13812 Capsella grandiflora
Cagra.2481s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2481: 188-10187 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373947 5261 Brassicaceae View MSA
123835905 5264 Brassicales-Malvales View MSA
124337966 5266 SBM View MSA
124243321 5268 Malvidae View MSA
124065696 5270 Rosid View MSA
123744612 5271 Pentapetalae View MSA
122796677 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain