Gene : Cagra.2438s0029 C. grandiflora v1.1
Defline:  (1 of 3) 2.4.1.29 - Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  29
Name:  ? Cagra.2438s0029 Secondary Identifier:  ? PAC:28909531
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1001 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2438s0029 0.5kb upstream 0.5kb upstream 6070 true Scaffold2438: 78255-84324 Capsella grandiflora
Cagra.2438s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold2438: 83825-84324 Capsella grandiflora
Cagra.2438s0029 0.5kb downstream 0.5kb downstream 6070 true Scaffold2438: 77755-83824 Capsella grandiflora
Cagra.2438s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold2438: 77755-78254 Capsella grandiflora
Cagra.2438s0029 1.0kb upstream 1.0kb upstream 6570 true Scaffold2438: 78255-84824 Capsella grandiflora
Cagra.2438s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold2438: 83825-84824 Capsella grandiflora
Cagra.2438s0029 1.0kb downstream 1.0kb downstream 6570 true Scaffold2438: 77255-83824 Capsella grandiflora
Cagra.2438s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold2438: 77255-78254 Capsella grandiflora
Cagra.2438s0029 2.0kb upstream 2.0kb upstream 7570 true Scaffold2438: 78255-85824 Capsella grandiflora
Cagra.2438s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold2438: 83825-85824 Capsella grandiflora
Cagra.2438s0029 2.0kb downstream 2.0kb downstream 7570 true Scaffold2438: 76255-83824 Capsella grandiflora
Cagra.2438s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold2438: 76255-78254 Capsella grandiflora
Cagra.2438s0029 5.0kb upstream 5.0kb upstream 10570 true Scaffold2438: 78255-88824 Capsella grandiflora
Cagra.2438s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold2438: 83825-88824 Capsella grandiflora
Cagra.2438s0029 5.0kb downstream 5.0kb downstream 10570 true Scaffold2438: 73255-83824 Capsella grandiflora
Cagra.2438s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold2438: 73255-78254 Capsella grandiflora
Cagra.2438s0029 10.0kb upstream 10.0kb upstream 15570 true Scaffold2438: 78255-93824 Capsella grandiflora
Cagra.2438s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold2438: 83825-93824 Capsella grandiflora
Cagra.2438s0029 10.0kb downstream 10.0kb downstream 15570 true Scaffold2438: 68255-83824 Capsella grandiflora
Cagra.2438s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold2438: 68255-78254 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365550 5261 Brassicaceae View MSA
123839580 5264 Brassicales-Malvales View MSA
124351037 5266 SBM View MSA
124248532 5268 Malvidae View MSA
124071949 5270 Rosid View MSA
123747849 5271 Pentapetalae View MSA
122795199 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain