Gene : Cagra.2438s0025 C. grandiflora v1.1
Genomic Order:  25 Name:  ? Cagra.2438s0025
Secondary Identifier:  ? PAC:28909526
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2438s0025 0.5kb upstream 0.5kb upstream 2008 true Scaffold2438: 61986-63993 Capsella grandiflora
Cagra.2438s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold2438: 61986-62485 Capsella grandiflora
Cagra.2438s0025 0.5kb downstream 0.5kb downstream 2008 true Scaffold2438: 62486-64493 Capsella grandiflora
Cagra.2438s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold2438: 63994-64493 Capsella grandiflora
Cagra.2438s0025 1.0kb upstream 1.0kb upstream 2508 true Scaffold2438: 61486-63993 Capsella grandiflora
Cagra.2438s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold2438: 61486-62485 Capsella grandiflora
Cagra.2438s0025 1.0kb downstream 1.0kb downstream 2508 true Scaffold2438: 62486-64993 Capsella grandiflora
Cagra.2438s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold2438: 63994-64993 Capsella grandiflora
Cagra.2438s0025 2.0kb upstream 2.0kb upstream 3508 true Scaffold2438: 60486-63993 Capsella grandiflora
Cagra.2438s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold2438: 60486-62485 Capsella grandiflora
Cagra.2438s0025 2.0kb downstream 2.0kb downstream 3508 true Scaffold2438: 62486-65993 Capsella grandiflora
Cagra.2438s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold2438: 63994-65993 Capsella grandiflora
Cagra.2438s0025 5.0kb upstream 5.0kb upstream 6508 true Scaffold2438: 57486-63993 Capsella grandiflora
Cagra.2438s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold2438: 57486-62485 Capsella grandiflora
Cagra.2438s0025 5.0kb downstream 5.0kb downstream 6508 true Scaffold2438: 62486-68993 Capsella grandiflora
Cagra.2438s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold2438: 63994-68993 Capsella grandiflora
Cagra.2438s0025 10.0kb upstream 10.0kb upstream 11508 true Scaffold2438: 52486-63993 Capsella grandiflora
Cagra.2438s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold2438: 52486-62485 Capsella grandiflora
Cagra.2438s0025 10.0kb downstream 10.0kb downstream 11508 true Scaffold2438: 62486-73993 Capsella grandiflora
Cagra.2438s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold2438: 63994-73993 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362185 5261 Brassicaceae View MSA
123798323 5264 Brassicales-Malvales View MSA
124295978 5266 SBM View MSA
124148266 5268 Malvidae View MSA
124073278 5270 Rosid View MSA
123747414 5271 Pentapetalae View MSA
122796371 5272 Eudicot View MSA
122042623 5273 Angiosperm View MSA
121349599 5274 Embryophyte View MSA
123428775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain