Gene : Cagra.2438s0046 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23076:SF49 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  46
Name:  ? Cagra.2438s0046 Secondary Identifier:  ? PAC:28909527
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2438s0046 0.5kb upstream 0.5kb upstream 5234 true Scaffold2438: 138667-143900 Capsella grandiflora
Cagra.2438s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold2438: 138667-139166 Capsella grandiflora
Cagra.2438s0046 0.5kb downstream 0.5kb downstream 5234 true Scaffold2438: 139167-144400 Capsella grandiflora
Cagra.2438s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold2438: 143901-144400 Capsella grandiflora
Cagra.2438s0046 1.0kb upstream 1.0kb upstream 5734 true Scaffold2438: 138167-143900 Capsella grandiflora
Cagra.2438s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold2438: 138167-139166 Capsella grandiflora
Cagra.2438s0046 1.0kb downstream 1.0kb downstream 5734 true Scaffold2438: 139167-144900 Capsella grandiflora
Cagra.2438s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold2438: 143901-144900 Capsella grandiflora
Cagra.2438s0046 2.0kb upstream 2.0kb upstream 6734 true Scaffold2438: 137167-143900 Capsella grandiflora
Cagra.2438s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold2438: 137167-139166 Capsella grandiflora
Cagra.2438s0046 2.0kb downstream 2.0kb downstream 6734 true Scaffold2438: 139167-145900 Capsella grandiflora
Cagra.2438s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold2438: 143901-145900 Capsella grandiflora
Cagra.2438s0046 5.0kb upstream 5.0kb upstream 9734 true Scaffold2438: 134167-143900 Capsella grandiflora
Cagra.2438s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold2438: 134167-139166 Capsella grandiflora
Cagra.2438s0046 5.0kb downstream 5.0kb downstream 8672 true Scaffold2438: 139167-147838 Capsella grandiflora
Cagra.2438s0046 5.0kb downstream 5.0kb downstream 3938 false Scaffold2438: 143901-147838 Capsella grandiflora
Cagra.2438s0046 10.0kb upstream 10.0kb upstream 14734 true Scaffold2438: 129167-143900 Capsella grandiflora
Cagra.2438s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold2438: 129167-139166 Capsella grandiflora
Cagra.2438s0046 10.0kb downstream 10.0kb downstream 8672 true Scaffold2438: 139167-147838 Capsella grandiflora
Cagra.2438s0046 10.0kb downstream 10.0kb downstream 3938 false Scaffold2438: 143901-147838 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361326 5261 Brassicaceae View MSA
123829147 5264 Brassicales-Malvales View MSA
124340816 5266 SBM View MSA
124240643 5268 Malvidae View MSA
124066007 5270 Rosid View MSA
123738416 5271 Pentapetalae View MSA
122790727 5272 Eudicot View MSA
122043853 5273 Angiosperm View MSA
121345104 5274 Embryophyte View MSA
123380156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain