Gene : Cagra.2453s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED Genomic Order:  2
Name:  ? Cagra.2453s0002 Secondary Identifier:  ? PAC:28905990
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2453s0002 0.5kb upstream 0.5kb upstream 2690 true Scaffold2453: 2456-5145 Capsella grandiflora
Cagra.2453s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2453: 2456-2955 Capsella grandiflora
Cagra.2453s0002 0.5kb downstream 0.5kb downstream 2690 true Scaffold2453: 2956-5645 Capsella grandiflora
Cagra.2453s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2453: 5146-5645 Capsella grandiflora
Cagra.2453s0002 1.0kb upstream 1.0kb upstream 3190 true Scaffold2453: 1956-5145 Capsella grandiflora
Cagra.2453s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2453: 1956-2955 Capsella grandiflora
Cagra.2453s0002 1.0kb downstream 1.0kb downstream 3190 true Scaffold2453: 2956-6145 Capsella grandiflora
Cagra.2453s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2453: 5146-6145 Capsella grandiflora
Cagra.2453s0002 2.0kb upstream 2.0kb upstream 4190 true Scaffold2453: 956-5145 Capsella grandiflora
Cagra.2453s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2453: 956-2955 Capsella grandiflora
Cagra.2453s0002 2.0kb downstream 2.0kb downstream 4190 true Scaffold2453: 2956-7145 Capsella grandiflora
Cagra.2453s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2453: 5146-7145 Capsella grandiflora
Cagra.2453s0002 5.0kb upstream 5.0kb upstream 5145 true Scaffold2453: 1-5145 Capsella grandiflora
Cagra.2453s0002 5.0kb upstream 5.0kb upstream 2955 false Scaffold2453: 1-2955 Capsella grandiflora
Cagra.2453s0002 5.0kb downstream 5.0kb downstream 7190 true Scaffold2453: 2956-10145 Capsella grandiflora
Cagra.2453s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold2453: 5146-10145 Capsella grandiflora
Cagra.2453s0002 10.0kb upstream 10.0kb upstream 5145 true Scaffold2453: 1-5145 Capsella grandiflora
Cagra.2453s0002 10.0kb upstream 10.0kb upstream 2955 false Scaffold2453: 1-2955 Capsella grandiflora
Cagra.2453s0002 10.0kb downstream 10.0kb downstream 12190 true Scaffold2453: 2956-15145 Capsella grandiflora
Cagra.2453s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold2453: 5146-15145 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363426 5261 Brassicaceae View MSA
123828950 5264 Brassicales-Malvales View MSA
124346593 5266 SBM View MSA
124248083 5268 Malvidae View MSA
124067070 5270 Rosid View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain