Gene : Cagra.2440s0006 C. grandiflora v1.1
Defline:  (1 of 7) PF07714//PF14380 - Protein tyrosine kinase (Pkinase_Tyr) // Wall-associated receptor kinase C-terminal (WAK_assoc) Genomic Order:  6
Name:  ? Cagra.2440s0006 Secondary Identifier:  ? PAC:28920084
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7409 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2440s0006 0.5kb upstream 0.5kb upstream 2727 true Scaffold2440: 20837-23563 Capsella grandiflora
Cagra.2440s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2440: 23064-23563 Capsella grandiflora
Cagra.2440s0006 0.5kb downstream 0.5kb downstream 2727 true Scaffold2440: 20337-23063 Capsella grandiflora
Cagra.2440s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2440: 20337-20836 Capsella grandiflora
Cagra.2440s0006 1.0kb upstream 1.0kb upstream 3227 true Scaffold2440: 20837-24063 Capsella grandiflora
Cagra.2440s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2440: 23064-24063 Capsella grandiflora
Cagra.2440s0006 1.0kb downstream 1.0kb downstream 3227 true Scaffold2440: 19837-23063 Capsella grandiflora
Cagra.2440s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2440: 19837-20836 Capsella grandiflora
Cagra.2440s0006 2.0kb upstream 2.0kb upstream 4227 true Scaffold2440: 20837-25063 Capsella grandiflora
Cagra.2440s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2440: 23064-25063 Capsella grandiflora
Cagra.2440s0006 2.0kb downstream 2.0kb downstream 4227 true Scaffold2440: 18837-23063 Capsella grandiflora
Cagra.2440s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2440: 18837-20836 Capsella grandiflora
Cagra.2440s0006 5.0kb upstream 5.0kb upstream 7227 true Scaffold2440: 20837-28063 Capsella grandiflora
Cagra.2440s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2440: 23064-28063 Capsella grandiflora
Cagra.2440s0006 5.0kb downstream 5.0kb downstream 7227 true Scaffold2440: 15837-23063 Capsella grandiflora
Cagra.2440s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2440: 15837-20836 Capsella grandiflora
Cagra.2440s0006 10.0kb upstream 10.0kb upstream 7637 true Scaffold2440: 20837-28473 Capsella grandiflora
Cagra.2440s0006 10.0kb upstream 10.0kb upstream 5410 false Scaffold2440: 23064-28473 Capsella grandiflora
Cagra.2440s0006 10.0kb downstream 10.0kb downstream 12227 true Scaffold2440: 10837-23063 Capsella grandiflora
Cagra.2440s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2440: 10837-20836 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344002 5261 Brassicaceae View MSA
123841678 5264 Brassicales-Malvales View MSA
124350842 5266 SBM View MSA
124254633 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain