Gene : Cagra.2453s0011 C. grandiflora v1.1
Defline:  (1 of 1) KOG2840 - Uncharacterized conserved protein with similarity to predicted ATPase of the PP-loop superfamily Genomic Order:  11
Name:  ? Cagra.2453s0011 Secondary Identifier:  ? PAC:28905985
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2453s0011 0.5kb upstream 0.5kb upstream 2836 true Scaffold2453: 33794-36629 Capsella grandiflora
Cagra.2453s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold2453: 36130-36629 Capsella grandiflora
Cagra.2453s0011 0.5kb downstream 0.5kb downstream 2836 true Scaffold2453: 33294-36129 Capsella grandiflora
Cagra.2453s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold2453: 33294-33793 Capsella grandiflora
Cagra.2453s0011 1.0kb upstream 1.0kb upstream 3336 true Scaffold2453: 33794-37129 Capsella grandiflora
Cagra.2453s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold2453: 36130-37129 Capsella grandiflora
Cagra.2453s0011 1.0kb downstream 1.0kb downstream 3336 true Scaffold2453: 32794-36129 Capsella grandiflora
Cagra.2453s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold2453: 32794-33793 Capsella grandiflora
Cagra.2453s0011 2.0kb upstream 2.0kb upstream 4336 true Scaffold2453: 33794-38129 Capsella grandiflora
Cagra.2453s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold2453: 36130-38129 Capsella grandiflora
Cagra.2453s0011 2.0kb downstream 2.0kb downstream 4336 true Scaffold2453: 31794-36129 Capsella grandiflora
Cagra.2453s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold2453: 31794-33793 Capsella grandiflora
Cagra.2453s0011 5.0kb upstream 5.0kb upstream 7336 true Scaffold2453: 33794-41129 Capsella grandiflora
Cagra.2453s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold2453: 36130-41129 Capsella grandiflora
Cagra.2453s0011 5.0kb downstream 5.0kb downstream 7336 true Scaffold2453: 28794-36129 Capsella grandiflora
Cagra.2453s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold2453: 28794-33793 Capsella grandiflora
Cagra.2453s0011 10.0kb upstream 10.0kb upstream 12336 true Scaffold2453: 33794-46129 Capsella grandiflora
Cagra.2453s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold2453: 36130-46129 Capsella grandiflora
Cagra.2453s0011 10.0kb downstream 10.0kb downstream 12336 true Scaffold2453: 23794-36129 Capsella grandiflora
Cagra.2453s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold2453: 23794-33793 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333248 5261 Brassicaceae Singleton cluster - no MSA
123774215 5264 Brassicales-Malvales Singleton cluster - no MSA
124272667 5266 SBM Singleton cluster - no MSA
124128443 5268 Malvidae Singleton cluster - no MSA
124041181 5270 Rosid View MSA
123742084 5271 Pentapetalae View MSA
122790612 5272 Eudicot View MSA
122048376 5273 Angiosperm View MSA
121346123 5274 Embryophyte View MSA
123424890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain