Gene : Cagra.2460s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22601:SF22 - OLIGOPEPTIDE TRANSPORTER 6-RELATED Genomic Order:  1
Name:  ? Cagra.2460s0001 Secondary Identifier:  ? PAC:28897543
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2460s0001 0.5kb upstream 0.5kb upstream 3662 true Scaffold2460: 6297-9958 Capsella grandiflora
Cagra.2460s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2460: 6297-6796 Capsella grandiflora
Cagra.2460s0001 0.5kb downstream 0.5kb downstream 3662 true Scaffold2460: 6797-10458 Capsella grandiflora
Cagra.2460s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2460: 9959-10458 Capsella grandiflora
Cagra.2460s0001 1.0kb upstream 1.0kb upstream 4162 true Scaffold2460: 5797-9958 Capsella grandiflora
Cagra.2460s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2460: 5797-6796 Capsella grandiflora
Cagra.2460s0001 1.0kb downstream 1.0kb downstream 4162 true Scaffold2460: 6797-10958 Capsella grandiflora
Cagra.2460s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2460: 9959-10958 Capsella grandiflora
Cagra.2460s0001 2.0kb upstream 2.0kb upstream 5162 true Scaffold2460: 4797-9958 Capsella grandiflora
Cagra.2460s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2460: 4797-6796 Capsella grandiflora
Cagra.2460s0001 2.0kb downstream 2.0kb downstream 5162 true Scaffold2460: 6797-11958 Capsella grandiflora
Cagra.2460s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2460: 9959-11958 Capsella grandiflora
Cagra.2460s0001 5.0kb upstream 5.0kb upstream 8162 true Scaffold2460: 1797-9958 Capsella grandiflora
Cagra.2460s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2460: 1797-6796 Capsella grandiflora
Cagra.2460s0001 5.0kb downstream 5.0kb downstream 8162 true Scaffold2460: 6797-14958 Capsella grandiflora
Cagra.2460s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2460: 9959-14958 Capsella grandiflora
Cagra.2460s0001 10.0kb upstream 10.0kb upstream 9958 true Scaffold2460: 1-9958 Capsella grandiflora
Cagra.2460s0001 10.0kb upstream 10.0kb upstream 6796 false Scaffold2460: 1-6796 Capsella grandiflora
Cagra.2460s0001 10.0kb downstream 10.0kb downstream 13162 true Scaffold2460: 6797-19958 Capsella grandiflora
Cagra.2460s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold2460: 9959-19958 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377595 5261 Brassicaceae View MSA
123835002 5264 Brassicales-Malvales View MSA
124336629 5266 SBM View MSA
124237972 5268 Malvidae View MSA
124050403 5270 Rosid View MSA
123750200 5271 Pentapetalae View MSA
122797569 5272 Eudicot View MSA
122049856 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain