Gene : Cagra.2460s0044 C. grandiflora v1.1
Defline:  (1 of 5) 1.1.1.39 - Malate dehydrogenase (decarboxylating) / Pyruvic-malic carboxylase Genomic Order:  44
Name:  ? Cagra.2460s0044 Secondary Identifier:  ? PAC:28897502
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLUCONEO-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-7115 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2460s0044 0.5kb upstream 0.5kb upstream 940 true Scaffold2460: 144475-145414 Capsella grandiflora
Cagra.2460s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold2460: 144475-144974 Capsella grandiflora
Cagra.2460s0044 0.5kb downstream 0.5kb downstream 940 true Scaffold2460: 144975-145914 Capsella grandiflora
Cagra.2460s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold2460: 145415-145914 Capsella grandiflora
Cagra.2460s0044 1.0kb upstream 1.0kb upstream 1440 true Scaffold2460: 143975-145414 Capsella grandiflora
Cagra.2460s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold2460: 143975-144974 Capsella grandiflora
Cagra.2460s0044 1.0kb downstream 1.0kb downstream 1440 true Scaffold2460: 144975-146414 Capsella grandiflora
Cagra.2460s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold2460: 145415-146414 Capsella grandiflora
Cagra.2460s0044 2.0kb upstream 2.0kb upstream 2440 true Scaffold2460: 142975-145414 Capsella grandiflora
Cagra.2460s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold2460: 142975-144974 Capsella grandiflora
Cagra.2460s0044 2.0kb downstream 2.0kb downstream 2440 true Scaffold2460: 144975-147414 Capsella grandiflora
Cagra.2460s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold2460: 145415-147414 Capsella grandiflora
Cagra.2460s0044 5.0kb upstream 5.0kb upstream 5440 true Scaffold2460: 139975-145414 Capsella grandiflora
Cagra.2460s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold2460: 139975-144974 Capsella grandiflora
Cagra.2460s0044 5.0kb downstream 5.0kb downstream 5440 true Scaffold2460: 144975-150414 Capsella grandiflora
Cagra.2460s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold2460: 145415-150414 Capsella grandiflora
Cagra.2460s0044 10.0kb upstream 10.0kb upstream 10440 true Scaffold2460: 134975-145414 Capsella grandiflora
Cagra.2460s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold2460: 134975-144974 Capsella grandiflora
Cagra.2460s0044 10.0kb downstream 10.0kb downstream 10440 true Scaffold2460: 144975-155414 Capsella grandiflora
Cagra.2460s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold2460: 145415-155414 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371722 5261 Brassicaceae View MSA
123838955 5264 Brassicales-Malvales View MSA
124337448 5266 SBM View MSA
124248730 5268 Malvidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain