Gene : Cagra.2406s0001 C. grandiflora v1.1
Defline:  (1 of 2) 6.2.1.34 - Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase Genomic Order:  1
Name:  ? Cagra.2406s0001 Secondary Identifier:  ? PAC:28913758
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1121 Capsella grandiflora pathologic  
Cgrandiflora PWY1F-FLAVSYN Capsella grandiflora pathologic  
Cgrandiflora PWY-361 Capsella grandiflora pathologic  
Cgrandiflora PWY-6435 Capsella grandiflora pathologic  
Cgrandiflora PWY-6673 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2406s0001 0.5kb upstream 0.5kb upstream 4765 true Scaffold2406: 19-4783 Capsella grandiflora
Cagra.2406s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2406: 4284-4783 Capsella grandiflora
Cagra.2406s0001 0.5kb downstream 0.5kb downstream 4283 true Scaffold2406: 1-4283 Capsella grandiflora
Cagra.2406s0001 0.5kb downstream 0.5kb downstream 18 false Scaffold2406: 1-18 Capsella grandiflora
Cagra.2406s0001 1.0kb upstream 1.0kb upstream 5265 true Scaffold2406: 19-5283 Capsella grandiflora
Cagra.2406s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2406: 4284-5283 Capsella grandiflora
Cagra.2406s0001 1.0kb downstream 1.0kb downstream 4283 true Scaffold2406: 1-4283 Capsella grandiflora
Cagra.2406s0001 1.0kb downstream 1.0kb downstream 18 false Scaffold2406: 1-18 Capsella grandiflora
Cagra.2406s0001 2.0kb upstream 2.0kb upstream 6265 true Scaffold2406: 19-6283 Capsella grandiflora
Cagra.2406s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2406: 4284-6283 Capsella grandiflora
Cagra.2406s0001 2.0kb downstream 2.0kb downstream 4283 true Scaffold2406: 1-4283 Capsella grandiflora
Cagra.2406s0001 2.0kb downstream 2.0kb downstream 18 false Scaffold2406: 1-18 Capsella grandiflora
Cagra.2406s0001 5.0kb upstream 5.0kb upstream 9265 true Scaffold2406: 19-9283 Capsella grandiflora
Cagra.2406s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2406: 4284-9283 Capsella grandiflora
Cagra.2406s0001 5.0kb downstream 5.0kb downstream 4283 true Scaffold2406: 1-4283 Capsella grandiflora
Cagra.2406s0001 5.0kb downstream 5.0kb downstream 18 false Scaffold2406: 1-18 Capsella grandiflora
Cagra.2406s0001 10.0kb upstream 10.0kb upstream 14265 true Scaffold2406: 19-14283 Capsella grandiflora
Cagra.2406s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold2406: 4284-14283 Capsella grandiflora
Cagra.2406s0001 10.0kb downstream 10.0kb downstream 4283 true Scaffold2406: 1-4283 Capsella grandiflora
Cagra.2406s0001 10.0kb downstream 10.0kb downstream 18 false Scaffold2406: 1-18 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374575 5261 Brassicaceae View MSA
123829315 5264 Brassicales-Malvales View MSA
124337093 5266 SBM View MSA
124239638 5268 Malvidae View MSA
124063529 5270 Rosid View MSA
123738118 5271 Pentapetalae View MSA
122792374 5272 Eudicot View MSA
122048251 5273 Angiosperm View MSA
121345883 5274 Embryophyte View MSA
123380283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain