Gene : Cagra.2418s0020 C. grandiflora v1.1
Defline:  (1 of 1) 2.4.2.8 - Hypoxanthine phosphoribosyltransferase / Transphosphoribosidase Genomic Order:  20
Name:  ? Cagra.2418s0020 Secondary Identifier:  ? PAC:28906118
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6599 Capsella grandiflora pathologic  
Cgrandiflora PWY-6609 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2418s0020 0.5kb upstream 0.5kb upstream 1911 true Scaffold2418: 61543-63453 Capsella grandiflora
Cagra.2418s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2418: 62954-63453 Capsella grandiflora
Cagra.2418s0020 0.5kb downstream 0.5kb downstream 1911 true Scaffold2418: 61043-62953 Capsella grandiflora
Cagra.2418s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2418: 61043-61542 Capsella grandiflora
Cagra.2418s0020 1.0kb upstream 1.0kb upstream 2411 true Scaffold2418: 61543-63953 Capsella grandiflora
Cagra.2418s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2418: 62954-63953 Capsella grandiflora
Cagra.2418s0020 1.0kb downstream 1.0kb downstream 2411 true Scaffold2418: 60543-62953 Capsella grandiflora
Cagra.2418s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2418: 60543-61542 Capsella grandiflora
Cagra.2418s0020 2.0kb upstream 2.0kb upstream 3411 true Scaffold2418: 61543-64953 Capsella grandiflora
Cagra.2418s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold2418: 62954-64953 Capsella grandiflora
Cagra.2418s0020 2.0kb downstream 2.0kb downstream 3411 true Scaffold2418: 59543-62953 Capsella grandiflora
Cagra.2418s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2418: 59543-61542 Capsella grandiflora
Cagra.2418s0020 5.0kb upstream 5.0kb upstream 6411 true Scaffold2418: 61543-67953 Capsella grandiflora
Cagra.2418s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold2418: 62954-67953 Capsella grandiflora
Cagra.2418s0020 5.0kb downstream 5.0kb downstream 6411 true Scaffold2418: 56543-62953 Capsella grandiflora
Cagra.2418s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold2418: 56543-61542 Capsella grandiflora
Cagra.2418s0020 10.0kb upstream 10.0kb upstream 11411 true Scaffold2418: 61543-72953 Capsella grandiflora
Cagra.2418s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold2418: 62954-72953 Capsella grandiflora
Cagra.2418s0020 10.0kb downstream 10.0kb downstream 11411 true Scaffold2418: 51543-62953 Capsella grandiflora
Cagra.2418s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold2418: 51543-61542 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373421 5261 Brassicaceae View MSA
123830153 5264 Brassicales-Malvales View MSA
124341354 5266 SBM View MSA
124240466 5268 Malvidae View MSA
124065096 5270 Rosid View MSA
123736484 5271 Pentapetalae View MSA
122787772 5272 Eudicot View MSA
122042893 5273 Angiosperm View MSA
121347009 5274 Embryophyte View MSA
123425408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain