Gene : Cagra.2420s0015 C. grandiflora v1.1
Defline:  (1 of 33) PF03000 - NPH3 family (NPH3) Genomic Order:  15
Name:  ? Cagra.2420s0015 Secondary Identifier:  ? PAC:28897176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2420s0015 0.5kb upstream 0.5kb upstream 3549 true Scaffold2420: 57418-60966 Capsella grandiflora
Cagra.2420s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold2420: 60467-60966 Capsella grandiflora
Cagra.2420s0015 0.5kb downstream 0.5kb downstream 3549 true Scaffold2420: 56918-60466 Capsella grandiflora
Cagra.2420s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold2420: 56918-57417 Capsella grandiflora
Cagra.2420s0015 1.0kb upstream 1.0kb upstream 4049 true Scaffold2420: 57418-61466 Capsella grandiflora
Cagra.2420s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold2420: 60467-61466 Capsella grandiflora
Cagra.2420s0015 1.0kb downstream 1.0kb downstream 4049 true Scaffold2420: 56418-60466 Capsella grandiflora
Cagra.2420s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold2420: 56418-57417 Capsella grandiflora
Cagra.2420s0015 2.0kb upstream 2.0kb upstream 5049 true Scaffold2420: 57418-62466 Capsella grandiflora
Cagra.2420s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold2420: 60467-62466 Capsella grandiflora
Cagra.2420s0015 2.0kb downstream 2.0kb downstream 5049 true Scaffold2420: 55418-60466 Capsella grandiflora
Cagra.2420s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold2420: 55418-57417 Capsella grandiflora
Cagra.2420s0015 5.0kb upstream 5.0kb upstream 8049 true Scaffold2420: 57418-65466 Capsella grandiflora
Cagra.2420s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold2420: 60467-65466 Capsella grandiflora
Cagra.2420s0015 5.0kb downstream 5.0kb downstream 8049 true Scaffold2420: 52418-60466 Capsella grandiflora
Cagra.2420s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold2420: 52418-57417 Capsella grandiflora
Cagra.2420s0015 10.0kb upstream 10.0kb upstream 9884 true Scaffold2420: 57418-67301 Capsella grandiflora
Cagra.2420s0015 10.0kb upstream 10.0kb upstream 6835 false Scaffold2420: 60467-67301 Capsella grandiflora
Cagra.2420s0015 10.0kb downstream 10.0kb downstream 13049 true Scaffold2420: 47418-60466 Capsella grandiflora
Cagra.2420s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold2420: 47418-57417 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378272 5261 Brassicaceae View MSA
123836731 5264 Brassicales-Malvales View MSA
124346744 5266 SBM View MSA
124246387 5268 Malvidae View MSA
124069355 5270 Rosid View MSA
123750783 5271 Pentapetalae View MSA
122794459 5272 Eudicot View MSA
122048386 5273 Angiosperm View MSA
121349864 5274 Embryophyte View MSA
123381475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain