Gene : Cagra.2420s0014 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11599:SF13 - PROTEASOME SUBUNIT ALPHA TYPE-4 Genomic Order:  14
Name:  ? Cagra.2420s0014 Secondary Identifier:  ? PAC:28897170
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2420s0014 0.5kb upstream 0.5kb upstream 2994 true Scaffold2420: 54018-57011 Capsella grandiflora
Cagra.2420s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold2420: 54018-54517 Capsella grandiflora
Cagra.2420s0014 0.5kb downstream 0.5kb downstream 2994 true Scaffold2420: 54518-57511 Capsella grandiflora
Cagra.2420s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold2420: 57012-57511 Capsella grandiflora
Cagra.2420s0014 1.0kb upstream 1.0kb upstream 3494 true Scaffold2420: 53518-57011 Capsella grandiflora
Cagra.2420s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold2420: 53518-54517 Capsella grandiflora
Cagra.2420s0014 1.0kb downstream 1.0kb downstream 3494 true Scaffold2420: 54518-58011 Capsella grandiflora
Cagra.2420s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold2420: 57012-58011 Capsella grandiflora
Cagra.2420s0014 2.0kb upstream 2.0kb upstream 4494 true Scaffold2420: 52518-57011 Capsella grandiflora
Cagra.2420s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold2420: 52518-54517 Capsella grandiflora
Cagra.2420s0014 2.0kb downstream 2.0kb downstream 4494 true Scaffold2420: 54518-59011 Capsella grandiflora
Cagra.2420s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold2420: 57012-59011 Capsella grandiflora
Cagra.2420s0014 5.0kb upstream 5.0kb upstream 7494 true Scaffold2420: 49518-57011 Capsella grandiflora
Cagra.2420s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold2420: 49518-54517 Capsella grandiflora
Cagra.2420s0014 5.0kb downstream 5.0kb downstream 7494 true Scaffold2420: 54518-62011 Capsella grandiflora
Cagra.2420s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold2420: 57012-62011 Capsella grandiflora
Cagra.2420s0014 10.0kb upstream 10.0kb upstream 12494 true Scaffold2420: 44518-57011 Capsella grandiflora
Cagra.2420s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold2420: 44518-54517 Capsella grandiflora
Cagra.2420s0014 10.0kb downstream 10.0kb downstream 12494 true Scaffold2420: 54518-67011 Capsella grandiflora
Cagra.2420s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold2420: 57012-67011 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378710 5261 Brassicaceae View MSA
123836342 5264 Brassicales-Malvales View MSA
124339595 5266 SBM View MSA
124237536 5268 Malvidae View MSA
124065392 5270 Rosid View MSA
123752544 5271 Pentapetalae View MSA
122786754 5272 Eudicot View MSA
122049144 5273 Angiosperm View MSA
121351432 5274 Embryophyte View MSA
123426590 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain