Gene : Cagra.2374s0039 C. grandiflora v1.1
Defline:  (1 of 1) PF13371//PF14559 - Tetratricopeptide repeat (TPR_9) // Tetratricopeptide repeat (TPR_19) Genomic Order:  39
Name:  ? Cagra.2374s0039 Secondary Identifier:  ? PAC:28894629
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2374s0039 0.5kb upstream 0.5kb upstream 2090 true Scaffold2374: 152721-154810 Capsella grandiflora
Cagra.2374s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold2374: 154311-154810 Capsella grandiflora
Cagra.2374s0039 0.5kb downstream 0.5kb downstream 2090 true Scaffold2374: 152221-154310 Capsella grandiflora
Cagra.2374s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold2374: 152221-152720 Capsella grandiflora
Cagra.2374s0039 1.0kb upstream 1.0kb upstream 2590 true Scaffold2374: 152721-155310 Capsella grandiflora
Cagra.2374s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold2374: 154311-155310 Capsella grandiflora
Cagra.2374s0039 1.0kb downstream 1.0kb downstream 2590 true Scaffold2374: 151721-154310 Capsella grandiflora
Cagra.2374s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold2374: 151721-152720 Capsella grandiflora
Cagra.2374s0039 2.0kb upstream 2.0kb upstream 3590 true Scaffold2374: 152721-156310 Capsella grandiflora
Cagra.2374s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold2374: 154311-156310 Capsella grandiflora
Cagra.2374s0039 2.0kb downstream 2.0kb downstream 3590 true Scaffold2374: 150721-154310 Capsella grandiflora
Cagra.2374s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold2374: 150721-152720 Capsella grandiflora
Cagra.2374s0039 5.0kb upstream 5.0kb upstream 6590 true Scaffold2374: 152721-159310 Capsella grandiflora
Cagra.2374s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold2374: 154311-159310 Capsella grandiflora
Cagra.2374s0039 5.0kb downstream 5.0kb downstream 6590 true Scaffold2374: 147721-154310 Capsella grandiflora
Cagra.2374s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold2374: 147721-152720 Capsella grandiflora
Cagra.2374s0039 10.0kb upstream 10.0kb upstream 11590 true Scaffold2374: 152721-164310 Capsella grandiflora
Cagra.2374s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold2374: 154311-164310 Capsella grandiflora
Cagra.2374s0039 10.0kb downstream 10.0kb downstream 11590 true Scaffold2374: 142721-154310 Capsella grandiflora
Cagra.2374s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold2374: 142721-152720 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365392 5261 Brassicaceae View MSA
123831632 5264 Brassicales-Malvales View MSA
124340670 5266 SBM View MSA
124239953 5268 Malvidae View MSA
124065454 5270 Rosid View MSA
123736679 5271 Pentapetalae View MSA
122790556 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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