Gene : Cagra.2381s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10954 - RIBONUCLEASE H2 SUBUNIT A Genomic Order:  16
Name:  ? Cagra.2381s0016 Secondary Identifier:  ? PAC:28900785
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2381s0016 0.5kb upstream 0.5kb upstream 4229 true Scaffold2381: 81946-86174 Capsella grandiflora
Cagra.2381s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold2381: 85675-86174 Capsella grandiflora
Cagra.2381s0016 0.5kb downstream 0.5kb downstream 4229 true Scaffold2381: 81446-85674 Capsella grandiflora
Cagra.2381s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold2381: 81446-81945 Capsella grandiflora
Cagra.2381s0016 1.0kb upstream 1.0kb upstream 4729 true Scaffold2381: 81946-86674 Capsella grandiflora
Cagra.2381s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold2381: 85675-86674 Capsella grandiflora
Cagra.2381s0016 1.0kb downstream 1.0kb downstream 4729 true Scaffold2381: 80946-85674 Capsella grandiflora
Cagra.2381s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold2381: 80946-81945 Capsella grandiflora
Cagra.2381s0016 2.0kb upstream 2.0kb upstream 5729 true Scaffold2381: 81946-87674 Capsella grandiflora
Cagra.2381s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold2381: 85675-87674 Capsella grandiflora
Cagra.2381s0016 2.0kb downstream 2.0kb downstream 5729 true Scaffold2381: 79946-85674 Capsella grandiflora
Cagra.2381s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold2381: 79946-81945 Capsella grandiflora
Cagra.2381s0016 5.0kb upstream 5.0kb upstream 8729 true Scaffold2381: 81946-90674 Capsella grandiflora
Cagra.2381s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold2381: 85675-90674 Capsella grandiflora
Cagra.2381s0016 5.0kb downstream 5.0kb downstream 8729 true Scaffold2381: 76946-85674 Capsella grandiflora
Cagra.2381s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold2381: 76946-81945 Capsella grandiflora
Cagra.2381s0016 10.0kb upstream 10.0kb upstream 13729 true Scaffold2381: 81946-95674 Capsella grandiflora
Cagra.2381s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold2381: 85675-95674 Capsella grandiflora
Cagra.2381s0016 10.0kb downstream 10.0kb downstream 13729 true Scaffold2381: 71946-85674 Capsella grandiflora
Cagra.2381s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold2381: 71946-81945 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379076 5261 Brassicaceae View MSA
123837117 5264 Brassicales-Malvales View MSA
124347045 5266 SBM View MSA
124245584 5268 Malvidae View MSA
124069495 5270 Rosid View MSA
123745716 5271 Pentapetalae View MSA
122794048 5272 Eudicot View MSA
122048331 5273 Angiosperm View MSA
121344250 5274 Embryophyte View MSA
123427271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain