Gene : Cagra.2381s0014 C. grandiflora v1.1
Defline:  (1 of 4) 1.11.1.12 - Phospholipid-hydroperoxide glutathione peroxidase / Peroxidation-inhibiting protein Genomic Order:  14
Name:  ? Cagra.2381s0014 Secondary Identifier:  ? PAC:28900783
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-4081 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2381s0014 0.5kb upstream 0.5kb upstream 2526 true Scaffold2381: 58646-61171 Capsella grandiflora
Cagra.2381s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold2381: 58646-59145 Capsella grandiflora
Cagra.2381s0014 0.5kb downstream 0.5kb downstream 2526 true Scaffold2381: 59146-61671 Capsella grandiflora
Cagra.2381s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold2381: 61172-61671 Capsella grandiflora
Cagra.2381s0014 1.0kb upstream 1.0kb upstream 3026 true Scaffold2381: 58146-61171 Capsella grandiflora
Cagra.2381s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold2381: 58146-59145 Capsella grandiflora
Cagra.2381s0014 1.0kb downstream 1.0kb downstream 3026 true Scaffold2381: 59146-62171 Capsella grandiflora
Cagra.2381s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold2381: 61172-62171 Capsella grandiflora
Cagra.2381s0014 2.0kb upstream 2.0kb upstream 4026 true Scaffold2381: 57146-61171 Capsella grandiflora
Cagra.2381s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold2381: 57146-59145 Capsella grandiflora
Cagra.2381s0014 2.0kb downstream 2.0kb downstream 4026 true Scaffold2381: 59146-63171 Capsella grandiflora
Cagra.2381s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold2381: 61172-63171 Capsella grandiflora
Cagra.2381s0014 5.0kb upstream 5.0kb upstream 7026 true Scaffold2381: 54146-61171 Capsella grandiflora
Cagra.2381s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold2381: 54146-59145 Capsella grandiflora
Cagra.2381s0014 5.0kb downstream 5.0kb downstream 7026 true Scaffold2381: 59146-66171 Capsella grandiflora
Cagra.2381s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold2381: 61172-66171 Capsella grandiflora
Cagra.2381s0014 10.0kb upstream 10.0kb upstream 12026 true Scaffold2381: 49146-61171 Capsella grandiflora
Cagra.2381s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold2381: 49146-59145 Capsella grandiflora
Cagra.2381s0014 10.0kb downstream 10.0kb downstream 12026 true Scaffold2381: 59146-71171 Capsella grandiflora
Cagra.2381s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold2381: 61172-71171 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374017 5261 Brassicaceae View MSA
123838768 5264 Brassicales-Malvales View MSA
124342773 5266 SBM View MSA
124240030 5268 Malvidae View MSA
124063282 5270 Rosid View MSA
123740898 5271 Pentapetalae View MSA
122792011 5272 Eudicot View MSA
122046042 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain