Gene : Cagra.2350s0085 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11689:SF14 - CHLORIDE CHANNEL PROTEIN 2 Genomic Order:  85
Name:  ? Cagra.2350s0085 Secondary Identifier:  ? PAC:28908817
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2350s0085 0.5kb upstream 0.5kb upstream 3945 true Scaffold2350: 325262-329206 Capsella grandiflora
Cagra.2350s0085 0.5kb upstream 0.5kb upstream 500 false Scaffold2350: 328707-329206 Capsella grandiflora
Cagra.2350s0085 0.5kb downstream 0.5kb downstream 3945 true Scaffold2350: 324762-328706 Capsella grandiflora
Cagra.2350s0085 0.5kb downstream 0.5kb downstream 500 false Scaffold2350: 324762-325261 Capsella grandiflora
Cagra.2350s0085 1.0kb upstream 1.0kb upstream 4445 true Scaffold2350: 325262-329706 Capsella grandiflora
Cagra.2350s0085 1.0kb upstream 1.0kb upstream 1000 false Scaffold2350: 328707-329706 Capsella grandiflora
Cagra.2350s0085 1.0kb downstream 1.0kb downstream 4445 true Scaffold2350: 324262-328706 Capsella grandiflora
Cagra.2350s0085 1.0kb downstream 1.0kb downstream 1000 false Scaffold2350: 324262-325261 Capsella grandiflora
Cagra.2350s0085 2.0kb upstream 2.0kb upstream 5445 true Scaffold2350: 325262-330706 Capsella grandiflora
Cagra.2350s0085 2.0kb upstream 2.0kb upstream 2000 false Scaffold2350: 328707-330706 Capsella grandiflora
Cagra.2350s0085 2.0kb downstream 2.0kb downstream 5445 true Scaffold2350: 323262-328706 Capsella grandiflora
Cagra.2350s0085 2.0kb downstream 2.0kb downstream 2000 false Scaffold2350: 323262-325261 Capsella grandiflora
Cagra.2350s0085 5.0kb upstream 5.0kb upstream 8445 true Scaffold2350: 325262-333706 Capsella grandiflora
Cagra.2350s0085 5.0kb upstream 5.0kb upstream 5000 false Scaffold2350: 328707-333706 Capsella grandiflora
Cagra.2350s0085 5.0kb downstream 5.0kb downstream 8445 true Scaffold2350: 320262-328706 Capsella grandiflora
Cagra.2350s0085 5.0kb downstream 5.0kb downstream 5000 false Scaffold2350: 320262-325261 Capsella grandiflora
Cagra.2350s0085 10.0kb upstream 10.0kb upstream 13445 true Scaffold2350: 325262-338706 Capsella grandiflora
Cagra.2350s0085 10.0kb upstream 10.0kb upstream 10000 false Scaffold2350: 328707-338706 Capsella grandiflora
Cagra.2350s0085 10.0kb downstream 10.0kb downstream 13445 true Scaffold2350: 315262-328706 Capsella grandiflora
Cagra.2350s0085 10.0kb downstream 10.0kb downstream 10000 false Scaffold2350: 315262-325261 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361595 5261 Brassicaceae View MSA
123827881 5264 Brassicales-Malvales View MSA
124342078 5266 SBM View MSA
124252989 5268 Malvidae View MSA
124064511 5270 Rosid View MSA
123748133 5271 Pentapetalae View MSA
122793511 5272 Eudicot View MSA
122047702 5273 Angiosperm View MSA
121347705 5274 Embryophyte View MSA
123427001 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain