Gene : Cagra.2519s0058 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22870:SF138 - REGULATOR OF CHROMOSOME CONDENSATION DOMAIN-CONTAINING PROTEIN Genomic Order:  58
Name:  ? Cagra.2519s0058 Secondary Identifier:  ? PAC:28903969
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2519s0058 0.5kb upstream 0.5kb upstream 2683 true Scaffold2519: 223984-226666 Capsella grandiflora
Cagra.2519s0058 0.5kb upstream 0.5kb upstream 500 false Scaffold2519: 226167-226666 Capsella grandiflora
Cagra.2519s0058 0.5kb downstream 0.5kb downstream 2683 true Scaffold2519: 223484-226166 Capsella grandiflora
Cagra.2519s0058 0.5kb downstream 0.5kb downstream 500 false Scaffold2519: 223484-223983 Capsella grandiflora
Cagra.2519s0058 1.0kb upstream 1.0kb upstream 3183 true Scaffold2519: 223984-227166 Capsella grandiflora
Cagra.2519s0058 1.0kb upstream 1.0kb upstream 1000 false Scaffold2519: 226167-227166 Capsella grandiflora
Cagra.2519s0058 1.0kb downstream 1.0kb downstream 3183 true Scaffold2519: 222984-226166 Capsella grandiflora
Cagra.2519s0058 1.0kb downstream 1.0kb downstream 1000 false Scaffold2519: 222984-223983 Capsella grandiflora
Cagra.2519s0058 2.0kb upstream 2.0kb upstream 4183 true Scaffold2519: 223984-228166 Capsella grandiflora
Cagra.2519s0058 2.0kb upstream 2.0kb upstream 2000 false Scaffold2519: 226167-228166 Capsella grandiflora
Cagra.2519s0058 2.0kb downstream 2.0kb downstream 4183 true Scaffold2519: 221984-226166 Capsella grandiflora
Cagra.2519s0058 2.0kb downstream 2.0kb downstream 2000 false Scaffold2519: 221984-223983 Capsella grandiflora
Cagra.2519s0058 5.0kb upstream 5.0kb upstream 7183 true Scaffold2519: 223984-231166 Capsella grandiflora
Cagra.2519s0058 5.0kb upstream 5.0kb upstream 5000 false Scaffold2519: 226167-231166 Capsella grandiflora
Cagra.2519s0058 5.0kb downstream 5.0kb downstream 7183 true Scaffold2519: 218984-226166 Capsella grandiflora
Cagra.2519s0058 5.0kb downstream 5.0kb downstream 5000 false Scaffold2519: 218984-223983 Capsella grandiflora
Cagra.2519s0058 10.0kb upstream 10.0kb upstream 12183 true Scaffold2519: 223984-236166 Capsella grandiflora
Cagra.2519s0058 10.0kb upstream 10.0kb upstream 10000 false Scaffold2519: 226167-236166 Capsella grandiflora
Cagra.2519s0058 10.0kb downstream 10.0kb downstream 12183 true Scaffold2519: 213984-226166 Capsella grandiflora
Cagra.2519s0058 10.0kb downstream 10.0kb downstream 10000 false Scaffold2519: 213984-223983 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367726 5261 Brassicaceae View MSA
123832396 5264 Brassicales-Malvales View MSA
124336762 5266 SBM View MSA
124240058 5268 Malvidae View MSA
124071462 5270 Rosid View MSA
123750397 5271 Pentapetalae View MSA
122786735 5272 Eudicot View MSA
122049165 5273 Angiosperm View MSA
121344608 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain