Gene : Cagra.2524s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31189:SF7 - CUPIN FAMILY PROTEIN Genomic Order:  2
Name:  ? Cagra.2524s0002 Secondary Identifier:  ? PAC:28919925
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2524s0002 0.5kb upstream 0.5kb upstream 2933 true Scaffold2524: 5450-8382 Capsella grandiflora
Cagra.2524s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2524: 5450-5949 Capsella grandiflora
Cagra.2524s0002 0.5kb downstream 0.5kb downstream 2933 true Scaffold2524: 5950-8882 Capsella grandiflora
Cagra.2524s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2524: 8383-8882 Capsella grandiflora
Cagra.2524s0002 1.0kb upstream 1.0kb upstream 3433 true Scaffold2524: 4950-8382 Capsella grandiflora
Cagra.2524s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2524: 4950-5949 Capsella grandiflora
Cagra.2524s0002 1.0kb downstream 1.0kb downstream 3433 true Scaffold2524: 5950-9382 Capsella grandiflora
Cagra.2524s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2524: 8383-9382 Capsella grandiflora
Cagra.2524s0002 2.0kb upstream 2.0kb upstream 4433 true Scaffold2524: 3950-8382 Capsella grandiflora
Cagra.2524s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2524: 3950-5949 Capsella grandiflora
Cagra.2524s0002 2.0kb downstream 2.0kb downstream 4433 true Scaffold2524: 5950-10382 Capsella grandiflora
Cagra.2524s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2524: 8383-10382 Capsella grandiflora
Cagra.2524s0002 5.0kb upstream 5.0kb upstream 7433 true Scaffold2524: 950-8382 Capsella grandiflora
Cagra.2524s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold2524: 950-5949 Capsella grandiflora
Cagra.2524s0002 5.0kb downstream 5.0kb downstream 7433 true Scaffold2524: 5950-13382 Capsella grandiflora
Cagra.2524s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold2524: 8383-13382 Capsella grandiflora
Cagra.2524s0002 10.0kb upstream 10.0kb upstream 8382 true Scaffold2524: 1-8382 Capsella grandiflora
Cagra.2524s0002 10.0kb upstream 10.0kb upstream 5949 false Scaffold2524: 1-5949 Capsella grandiflora
Cagra.2524s0002 10.0kb downstream 10.0kb downstream 10778 true Scaffold2524: 5950-16727 Capsella grandiflora
Cagra.2524s0002 10.0kb downstream 10.0kb downstream 8345 false Scaffold2524: 8383-16727 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333291 5261 Brassicaceae Singleton cluster - no MSA
123838683 5264 Brassicales-Malvales View MSA
124339263 5266 SBM View MSA
124237600 5268 Malvidae View MSA
124064948 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain