Gene : Cagra.2346s0005 C. grandiflora v1.1
Defline:  (1 of 4) KOG0130 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) Genomic Order:  5
Name:  ? Cagra.2346s0005 Secondary Identifier:  ? PAC:28912152
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2346s0005 0.5kb upstream 0.5kb upstream 2506 true Scaffold2346: 24284-26789 Capsella grandiflora
Cagra.2346s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2346: 26290-26789 Capsella grandiflora
Cagra.2346s0005 0.5kb downstream 0.5kb downstream 2506 true Scaffold2346: 23784-26289 Capsella grandiflora
Cagra.2346s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2346: 23784-24283 Capsella grandiflora
Cagra.2346s0005 1.0kb upstream 1.0kb upstream 3006 true Scaffold2346: 24284-27289 Capsella grandiflora
Cagra.2346s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2346: 26290-27289 Capsella grandiflora
Cagra.2346s0005 1.0kb downstream 1.0kb downstream 3006 true Scaffold2346: 23284-26289 Capsella grandiflora
Cagra.2346s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2346: 23284-24283 Capsella grandiflora
Cagra.2346s0005 2.0kb upstream 2.0kb upstream 4006 true Scaffold2346: 24284-28289 Capsella grandiflora
Cagra.2346s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2346: 26290-28289 Capsella grandiflora
Cagra.2346s0005 2.0kb downstream 2.0kb downstream 4006 true Scaffold2346: 22284-26289 Capsella grandiflora
Cagra.2346s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2346: 22284-24283 Capsella grandiflora
Cagra.2346s0005 5.0kb upstream 5.0kb upstream 7006 true Scaffold2346: 24284-31289 Capsella grandiflora
Cagra.2346s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2346: 26290-31289 Capsella grandiflora
Cagra.2346s0005 5.0kb downstream 5.0kb downstream 7006 true Scaffold2346: 19284-26289 Capsella grandiflora
Cagra.2346s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2346: 19284-24283 Capsella grandiflora
Cagra.2346s0005 10.0kb upstream 10.0kb upstream 12006 true Scaffold2346: 24284-36289 Capsella grandiflora
Cagra.2346s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2346: 26290-36289 Capsella grandiflora
Cagra.2346s0005 10.0kb downstream 10.0kb downstream 12006 true Scaffold2346: 14284-26289 Capsella grandiflora
Cagra.2346s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2346: 14284-24283 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375086 5261 Brassicaceae View MSA
123838452 5264 Brassicales-Malvales View MSA
124337168 5266 SBM View MSA
124253360 5268 Malvidae View MSA
124067815 5270 Rosid View MSA
123738959 5271 Pentapetalae View MSA
122793356 5272 Eudicot View MSA
122042715 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121347293 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain