Gene : Cagra.2350s0032 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  32
Name:  ? Cagra.2350s0032 Secondary Identifier:  ? PAC:28908767
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2350s0032 0.5kb upstream 0.5kb upstream 4718 true Scaffold2350: 108589-113306 Capsella grandiflora
Cagra.2350s0032 0.5kb upstream 0.5kb upstream 500 false Scaffold2350: 108589-109088 Capsella grandiflora
Cagra.2350s0032 0.5kb downstream 0.5kb downstream 4718 true Scaffold2350: 109089-113806 Capsella grandiflora
Cagra.2350s0032 0.5kb downstream 0.5kb downstream 500 false Scaffold2350: 113307-113806 Capsella grandiflora
Cagra.2350s0032 1.0kb upstream 1.0kb upstream 5218 true Scaffold2350: 108089-113306 Capsella grandiflora
Cagra.2350s0032 1.0kb upstream 1.0kb upstream 1000 false Scaffold2350: 108089-109088 Capsella grandiflora
Cagra.2350s0032 1.0kb downstream 1.0kb downstream 5218 true Scaffold2350: 109089-114306 Capsella grandiflora
Cagra.2350s0032 1.0kb downstream 1.0kb downstream 1000 false Scaffold2350: 113307-114306 Capsella grandiflora
Cagra.2350s0032 2.0kb upstream 2.0kb upstream 6218 true Scaffold2350: 107089-113306 Capsella grandiflora
Cagra.2350s0032 2.0kb upstream 2.0kb upstream 2000 false Scaffold2350: 107089-109088 Capsella grandiflora
Cagra.2350s0032 2.0kb downstream 2.0kb downstream 6218 true Scaffold2350: 109089-115306 Capsella grandiflora
Cagra.2350s0032 2.0kb downstream 2.0kb downstream 2000 false Scaffold2350: 113307-115306 Capsella grandiflora
Cagra.2350s0032 5.0kb upstream 5.0kb upstream 9218 true Scaffold2350: 104089-113306 Capsella grandiflora
Cagra.2350s0032 5.0kb upstream 5.0kb upstream 5000 false Scaffold2350: 104089-109088 Capsella grandiflora
Cagra.2350s0032 5.0kb downstream 5.0kb downstream 9218 true Scaffold2350: 109089-118306 Capsella grandiflora
Cagra.2350s0032 5.0kb downstream 5.0kb downstream 5000 false Scaffold2350: 113307-118306 Capsella grandiflora
Cagra.2350s0032 10.0kb upstream 10.0kb upstream 14218 true Scaffold2350: 99089-113306 Capsella grandiflora
Cagra.2350s0032 10.0kb upstream 10.0kb upstream 10000 false Scaffold2350: 99089-109088 Capsella grandiflora
Cagra.2350s0032 10.0kb downstream 10.0kb downstream 14218 true Scaffold2350: 109089-123306 Capsella grandiflora
Cagra.2350s0032 10.0kb downstream 10.0kb downstream 10000 false Scaffold2350: 113307-123306 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367614 5261 Brassicaceae View MSA
123828029 5264 Brassicales-Malvales View MSA
124342299 5266 SBM View MSA
124240993 5268 Malvidae View MSA
124063959 5270 Rosid View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain