Gene : Cagra.2350s0050 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23334 - CCAAT/ENHANCER BINDING PROTEIN Genomic Order:  50
Name:  ? Cagra.2350s0050 Secondary Identifier:  ? PAC:28908823
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2350s0050 0.5kb upstream 0.5kb upstream 2216 true Scaffold2350: 177890-180105 Capsella grandiflora
Cagra.2350s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold2350: 177890-178389 Capsella grandiflora
Cagra.2350s0050 0.5kb downstream 0.5kb downstream 2216 true Scaffold2350: 178390-180605 Capsella grandiflora
Cagra.2350s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold2350: 180106-180605 Capsella grandiflora
Cagra.2350s0050 1.0kb upstream 1.0kb upstream 2716 true Scaffold2350: 177390-180105 Capsella grandiflora
Cagra.2350s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold2350: 177390-178389 Capsella grandiflora
Cagra.2350s0050 1.0kb downstream 1.0kb downstream 2716 true Scaffold2350: 178390-181105 Capsella grandiflora
Cagra.2350s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold2350: 180106-181105 Capsella grandiflora
Cagra.2350s0050 2.0kb upstream 2.0kb upstream 3716 true Scaffold2350: 176390-180105 Capsella grandiflora
Cagra.2350s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold2350: 176390-178389 Capsella grandiflora
Cagra.2350s0050 2.0kb downstream 2.0kb downstream 3716 true Scaffold2350: 178390-182105 Capsella grandiflora
Cagra.2350s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold2350: 180106-182105 Capsella grandiflora
Cagra.2350s0050 5.0kb upstream 5.0kb upstream 6716 true Scaffold2350: 173390-180105 Capsella grandiflora
Cagra.2350s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold2350: 173390-178389 Capsella grandiflora
Cagra.2350s0050 5.0kb downstream 5.0kb downstream 6716 true Scaffold2350: 178390-185105 Capsella grandiflora
Cagra.2350s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold2350: 180106-185105 Capsella grandiflora
Cagra.2350s0050 10.0kb upstream 10.0kb upstream 11716 true Scaffold2350: 168390-180105 Capsella grandiflora
Cagra.2350s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold2350: 168390-178389 Capsella grandiflora
Cagra.2350s0050 10.0kb downstream 10.0kb downstream 11716 true Scaffold2350: 178390-190105 Capsella grandiflora
Cagra.2350s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold2350: 180106-190105 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364297 5261 Brassicaceae View MSA
123840527 5264 Brassicales-Malvales View MSA
124343012 5266 SBM View MSA
124240098 5268 Malvidae View MSA
124062533 5270 Rosid View MSA
123737163 5271 Pentapetalae View MSA
122793272 5272 Eudicot View MSA
122047570 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain