Gene : Cagra.2350s0071 C. grandiflora v1.1
Defline:  (1 of 3) PTHR32002:SF3 - PROTEIN NLP1-RELATED Genomic Order:  71
Name:  ? Cagra.2350s0071 Secondary Identifier:  ? PAC:28908734
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2350s0071 0.5kb upstream 0.5kb upstream 4886 true Scaffold2350: 270678-275563 Capsella grandiflora
Cagra.2350s0071 0.5kb upstream 0.5kb upstream 500 false Scaffold2350: 275064-275563 Capsella grandiflora
Cagra.2350s0071 0.5kb downstream 0.5kb downstream 4886 true Scaffold2350: 270178-275063 Capsella grandiflora
Cagra.2350s0071 0.5kb downstream 0.5kb downstream 500 false Scaffold2350: 270178-270677 Capsella grandiflora
Cagra.2350s0071 1.0kb upstream 1.0kb upstream 5386 true Scaffold2350: 270678-276063 Capsella grandiflora
Cagra.2350s0071 1.0kb upstream 1.0kb upstream 1000 false Scaffold2350: 275064-276063 Capsella grandiflora
Cagra.2350s0071 1.0kb downstream 1.0kb downstream 5386 true Scaffold2350: 269678-275063 Capsella grandiflora
Cagra.2350s0071 1.0kb downstream 1.0kb downstream 1000 false Scaffold2350: 269678-270677 Capsella grandiflora
Cagra.2350s0071 2.0kb upstream 2.0kb upstream 6386 true Scaffold2350: 270678-277063 Capsella grandiflora
Cagra.2350s0071 2.0kb upstream 2.0kb upstream 2000 false Scaffold2350: 275064-277063 Capsella grandiflora
Cagra.2350s0071 2.0kb downstream 2.0kb downstream 6386 true Scaffold2350: 268678-275063 Capsella grandiflora
Cagra.2350s0071 2.0kb downstream 2.0kb downstream 2000 false Scaffold2350: 268678-270677 Capsella grandiflora
Cagra.2350s0071 5.0kb upstream 5.0kb upstream 9386 true Scaffold2350: 270678-280063 Capsella grandiflora
Cagra.2350s0071 5.0kb upstream 5.0kb upstream 5000 false Scaffold2350: 275064-280063 Capsella grandiflora
Cagra.2350s0071 5.0kb downstream 5.0kb downstream 9386 true Scaffold2350: 265678-275063 Capsella grandiflora
Cagra.2350s0071 5.0kb downstream 5.0kb downstream 5000 false Scaffold2350: 265678-270677 Capsella grandiflora
Cagra.2350s0071 10.0kb upstream 10.0kb upstream 14386 true Scaffold2350: 270678-285063 Capsella grandiflora
Cagra.2350s0071 10.0kb upstream 10.0kb upstream 10000 false Scaffold2350: 275064-285063 Capsella grandiflora
Cagra.2350s0071 10.0kb downstream 10.0kb downstream 14386 true Scaffold2350: 260678-275063 Capsella grandiflora
Cagra.2350s0071 10.0kb downstream 10.0kb downstream 10000 false Scaffold2350: 260678-270677 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369911 5261 Brassicaceae View MSA
123836171 5264 Brassicales-Malvales View MSA
124339276 5266 SBM View MSA
124251360 5268 Malvidae View MSA
124068649 5270 Rosid View MSA
123748855 5271 Pentapetalae View MSA
122793045 5272 Eudicot View MSA
122051349 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain