Gene : Cagra.2515s0065 C. grandiflora v1.1
Defline:  (1 of 3) PTHR19957:SF129 - SYNTAXIN-71-RELATED Genomic Order:  65
Name:  ? Cagra.2515s0065 Secondary Identifier:  ? PAC:28894390
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2515s0065 0.5kb upstream 0.5kb upstream 2821 true Scaffold2515: 194330-197150 Capsella grandiflora
Cagra.2515s0065 0.5kb upstream 0.5kb upstream 500 false Scaffold2515: 194330-194829 Capsella grandiflora
Cagra.2515s0065 0.5kb downstream 0.5kb downstream 2821 true Scaffold2515: 194830-197650 Capsella grandiflora
Cagra.2515s0065 0.5kb downstream 0.5kb downstream 500 false Scaffold2515: 197151-197650 Capsella grandiflora
Cagra.2515s0065 1.0kb upstream 1.0kb upstream 3321 true Scaffold2515: 193830-197150 Capsella grandiflora
Cagra.2515s0065 1.0kb upstream 1.0kb upstream 1000 false Scaffold2515: 193830-194829 Capsella grandiflora
Cagra.2515s0065 1.0kb downstream 1.0kb downstream 3321 true Scaffold2515: 194830-198150 Capsella grandiflora
Cagra.2515s0065 1.0kb downstream 1.0kb downstream 1000 false Scaffold2515: 197151-198150 Capsella grandiflora
Cagra.2515s0065 2.0kb upstream 2.0kb upstream 4321 true Scaffold2515: 192830-197150 Capsella grandiflora
Cagra.2515s0065 2.0kb upstream 2.0kb upstream 2000 false Scaffold2515: 192830-194829 Capsella grandiflora
Cagra.2515s0065 2.0kb downstream 2.0kb downstream 4321 true Scaffold2515: 194830-199150 Capsella grandiflora
Cagra.2515s0065 2.0kb downstream 2.0kb downstream 2000 false Scaffold2515: 197151-199150 Capsella grandiflora
Cagra.2515s0065 5.0kb upstream 5.0kb upstream 7321 true Scaffold2515: 189830-197150 Capsella grandiflora
Cagra.2515s0065 5.0kb upstream 5.0kb upstream 5000 false Scaffold2515: 189830-194829 Capsella grandiflora
Cagra.2515s0065 5.0kb downstream 5.0kb downstream 7321 true Scaffold2515: 194830-202150 Capsella grandiflora
Cagra.2515s0065 5.0kb downstream 5.0kb downstream 5000 false Scaffold2515: 197151-202150 Capsella grandiflora
Cagra.2515s0065 10.0kb upstream 10.0kb upstream 12321 true Scaffold2515: 184830-197150 Capsella grandiflora
Cagra.2515s0065 10.0kb upstream 10.0kb upstream 10000 false Scaffold2515: 184830-194829 Capsella grandiflora
Cagra.2515s0065 10.0kb downstream 10.0kb downstream 12321 true Scaffold2515: 194830-207150 Capsella grandiflora
Cagra.2515s0065 10.0kb downstream 10.0kb downstream 10000 false Scaffold2515: 197151-207150 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374285 5261 Brassicaceae View MSA
123836419 5264 Brassicales-Malvales View MSA
124345118 5266 SBM View MSA
124254385 5268 Malvidae View MSA
124061769 5270 Rosid View MSA
123743214 5271 Pentapetalae View MSA
122796614 5272 Eudicot View MSA
122044212 5273 Angiosperm View MSA
121345851 5274 Embryophyte View MSA
123426500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain