Gene : Cagra.2516s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31451:SF1 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Genomic Order:  2
Name:  ? Cagra.2516s0002 Secondary Identifier:  ? PAC:28900704
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2516s0002 0.5kb upstream 0.5kb upstream 3327 true Scaffold2516: 1949-5275 Capsella grandiflora
Cagra.2516s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2516: 4776-5275 Capsella grandiflora
Cagra.2516s0002 0.5kb downstream 0.5kb downstream 3327 true Scaffold2516: 1449-4775 Capsella grandiflora
Cagra.2516s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2516: 1449-1948 Capsella grandiflora
Cagra.2516s0002 1.0kb upstream 1.0kb upstream 3827 true Scaffold2516: 1949-5775 Capsella grandiflora
Cagra.2516s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2516: 4776-5775 Capsella grandiflora
Cagra.2516s0002 1.0kb downstream 1.0kb downstream 3827 true Scaffold2516: 949-4775 Capsella grandiflora
Cagra.2516s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2516: 949-1948 Capsella grandiflora
Cagra.2516s0002 2.0kb upstream 2.0kb upstream 4827 true Scaffold2516: 1949-6775 Capsella grandiflora
Cagra.2516s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2516: 4776-6775 Capsella grandiflora
Cagra.2516s0002 2.0kb downstream 2.0kb downstream 4775 true Scaffold2516: 1-4775 Capsella grandiflora
Cagra.2516s0002 2.0kb downstream 2.0kb downstream 1948 false Scaffold2516: 1-1948 Capsella grandiflora
Cagra.2516s0002 5.0kb upstream 5.0kb upstream 7827 true Scaffold2516: 1949-9775 Capsella grandiflora
Cagra.2516s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold2516: 4776-9775 Capsella grandiflora
Cagra.2516s0002 5.0kb downstream 5.0kb downstream 4775 true Scaffold2516: 1-4775 Capsella grandiflora
Cagra.2516s0002 5.0kb downstream 5.0kb downstream 1948 false Scaffold2516: 1-1948 Capsella grandiflora
Cagra.2516s0002 10.0kb upstream 10.0kb upstream 12827 true Scaffold2516: 1949-14775 Capsella grandiflora
Cagra.2516s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold2516: 4776-14775 Capsella grandiflora
Cagra.2516s0002 10.0kb downstream 10.0kb downstream 4775 true Scaffold2516: 1-4775 Capsella grandiflora
Cagra.2516s0002 10.0kb downstream 10.0kb downstream 1948 false Scaffold2516: 1-1948 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374374 5261 Brassicaceae View MSA
123836398 5264 Brassicales-Malvales View MSA
124336638 5266 SBM View MSA
124250952 5268 Malvidae View MSA
124068512 5270 Rosid View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain