Gene : Cagra.2516s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31579:SF11 - EXPRESSED PROTEIN Genomic Order:  3
Name:  ? Cagra.2516s0003 Secondary Identifier:  ? PAC:28900729
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2516s0003 0.5kb upstream 0.5kb upstream 2110 true Scaffold2516: 9593-11702 Capsella grandiflora
Cagra.2516s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2516: 9593-10092 Capsella grandiflora
Cagra.2516s0003 0.5kb downstream 0.5kb downstream 2110 true Scaffold2516: 10093-12202 Capsella grandiflora
Cagra.2516s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2516: 11703-12202 Capsella grandiflora
Cagra.2516s0003 1.0kb upstream 1.0kb upstream 2610 true Scaffold2516: 9093-11702 Capsella grandiflora
Cagra.2516s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2516: 9093-10092 Capsella grandiflora
Cagra.2516s0003 1.0kb downstream 1.0kb downstream 2610 true Scaffold2516: 10093-12702 Capsella grandiflora
Cagra.2516s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2516: 11703-12702 Capsella grandiflora
Cagra.2516s0003 2.0kb upstream 2.0kb upstream 3610 true Scaffold2516: 8093-11702 Capsella grandiflora
Cagra.2516s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2516: 8093-10092 Capsella grandiflora
Cagra.2516s0003 2.0kb downstream 2.0kb downstream 3610 true Scaffold2516: 10093-13702 Capsella grandiflora
Cagra.2516s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2516: 11703-13702 Capsella grandiflora
Cagra.2516s0003 5.0kb upstream 5.0kb upstream 6610 true Scaffold2516: 5093-11702 Capsella grandiflora
Cagra.2516s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2516: 5093-10092 Capsella grandiflora
Cagra.2516s0003 5.0kb downstream 5.0kb downstream 6610 true Scaffold2516: 10093-16702 Capsella grandiflora
Cagra.2516s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2516: 11703-16702 Capsella grandiflora
Cagra.2516s0003 10.0kb upstream 10.0kb upstream 11610 true Scaffold2516: 93-11702 Capsella grandiflora
Cagra.2516s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold2516: 93-10092 Capsella grandiflora
Cagra.2516s0003 10.0kb downstream 10.0kb downstream 11610 true Scaffold2516: 10093-21702 Capsella grandiflora
Cagra.2516s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2516: 11703-21702 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362464 5261 Brassicaceae View MSA
123836127 5264 Brassicales-Malvales View MSA
124340947 5266 SBM View MSA
124246421 5268 Malvidae View MSA
124071276 5270 Rosid View MSA
123751272 5271 Pentapetalae View MSA
122785688 5272 Eudicot View MSA
122045708 5273 Angiosperm View MSA
123429021 5275 Viridiplantae View MSA
121310489 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain