Gene : Cagra.2516s0023 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10721 - MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44 Genomic Order:  23
Name:  ? Cagra.2516s0023 Secondary Identifier:  ? PAC:28900724
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2516s0023 0.5kb upstream 0.5kb upstream 3110 true Scaffold2516: 70134-73243 Capsella grandiflora
Cagra.2516s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold2516: 70134-70633 Capsella grandiflora
Cagra.2516s0023 0.5kb downstream 0.5kb downstream 3110 true Scaffold2516: 70634-73743 Capsella grandiflora
Cagra.2516s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold2516: 73244-73743 Capsella grandiflora
Cagra.2516s0023 1.0kb upstream 1.0kb upstream 3610 true Scaffold2516: 69634-73243 Capsella grandiflora
Cagra.2516s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold2516: 69634-70633 Capsella grandiflora
Cagra.2516s0023 1.0kb downstream 1.0kb downstream 3610 true Scaffold2516: 70634-74243 Capsella grandiflora
Cagra.2516s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold2516: 73244-74243 Capsella grandiflora
Cagra.2516s0023 2.0kb upstream 2.0kb upstream 4610 true Scaffold2516: 68634-73243 Capsella grandiflora
Cagra.2516s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold2516: 68634-70633 Capsella grandiflora
Cagra.2516s0023 2.0kb downstream 2.0kb downstream 4610 true Scaffold2516: 70634-75243 Capsella grandiflora
Cagra.2516s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold2516: 73244-75243 Capsella grandiflora
Cagra.2516s0023 5.0kb upstream 5.0kb upstream 7610 true Scaffold2516: 65634-73243 Capsella grandiflora
Cagra.2516s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold2516: 65634-70633 Capsella grandiflora
Cagra.2516s0023 5.0kb downstream 5.0kb downstream 7610 true Scaffold2516: 70634-78243 Capsella grandiflora
Cagra.2516s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold2516: 73244-78243 Capsella grandiflora
Cagra.2516s0023 10.0kb upstream 10.0kb upstream 12610 true Scaffold2516: 60634-73243 Capsella grandiflora
Cagra.2516s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold2516: 60634-70633 Capsella grandiflora
Cagra.2516s0023 10.0kb downstream 10.0kb downstream 12610 true Scaffold2516: 70634-83243 Capsella grandiflora
Cagra.2516s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold2516: 73244-83243 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361111 5261 Brassicaceae View MSA
123834931 5264 Brassicales-Malvales View MSA
124342213 5266 SBM View MSA
124236920 5268 Malvidae View MSA
124062729 5270 Rosid View MSA
123741050 5271 Pentapetalae View MSA
122790039 5272 Eudicot View MSA
122045554 5273 Angiosperm View MSA
121345334 5274 Embryophyte View MSA
123424453 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain