Gene : Cagra.2310s0016 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10869:SF55 - OXOGLUTARATE/IRON-DEPENDENT OXYGENASE Genomic Order:  16
Name:  ? Cagra.2310s0016 Secondary Identifier:  ? PAC:28912334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2310s0016 0.5kb upstream 0.5kb upstream 2667 true Scaffold2310: 75061-77727 Capsella grandiflora
Cagra.2310s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold2310: 77228-77727 Capsella grandiflora
Cagra.2310s0016 0.5kb downstream 0.5kb downstream 2667 true Scaffold2310: 74561-77227 Capsella grandiflora
Cagra.2310s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold2310: 74561-75060 Capsella grandiflora
Cagra.2310s0016 1.0kb upstream 1.0kb upstream 3167 true Scaffold2310: 75061-78227 Capsella grandiflora
Cagra.2310s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold2310: 77228-78227 Capsella grandiflora
Cagra.2310s0016 1.0kb downstream 1.0kb downstream 3167 true Scaffold2310: 74061-77227 Capsella grandiflora
Cagra.2310s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold2310: 74061-75060 Capsella grandiflora
Cagra.2310s0016 2.0kb upstream 2.0kb upstream 4167 true Scaffold2310: 75061-79227 Capsella grandiflora
Cagra.2310s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold2310: 77228-79227 Capsella grandiflora
Cagra.2310s0016 2.0kb downstream 2.0kb downstream 4167 true Scaffold2310: 73061-77227 Capsella grandiflora
Cagra.2310s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold2310: 73061-75060 Capsella grandiflora
Cagra.2310s0016 5.0kb upstream 5.0kb upstream 7167 true Scaffold2310: 75061-82227 Capsella grandiflora
Cagra.2310s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold2310: 77228-82227 Capsella grandiflora
Cagra.2310s0016 5.0kb downstream 5.0kb downstream 7167 true Scaffold2310: 70061-77227 Capsella grandiflora
Cagra.2310s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold2310: 70061-75060 Capsella grandiflora
Cagra.2310s0016 10.0kb upstream 10.0kb upstream 12167 true Scaffold2310: 75061-87227 Capsella grandiflora
Cagra.2310s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold2310: 77228-87227 Capsella grandiflora
Cagra.2310s0016 10.0kb downstream 10.0kb downstream 12167 true Scaffold2310: 65061-77227 Capsella grandiflora
Cagra.2310s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold2310: 65061-75060 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375567 5261 Brassicaceae View MSA
123833866 5264 Brassicales-Malvales View MSA
124336948 5266 SBM View MSA
124247832 5268 Malvidae View MSA
124068610 5270 Rosid View MSA
123740803 5271 Pentapetalae View MSA
122792927 5272 Eudicot View MSA
122045302 5273 Angiosperm View MSA
121349816 5274 Embryophyte View MSA
123428732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain