Gene : Cagra.2315s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31314:SF5 - MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN-RELATED Genomic Order:  3
Name:  ? Cagra.2315s0003 Secondary Identifier:  ? PAC:28908191
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2315s0003 0.5kb upstream 0.5kb upstream 2711 true Scaffold2315: 9634-12344 Capsella grandiflora
Cagra.2315s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2315: 9634-10133 Capsella grandiflora
Cagra.2315s0003 0.5kb downstream 0.5kb downstream 2711 true Scaffold2315: 10134-12844 Capsella grandiflora
Cagra.2315s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2315: 12345-12844 Capsella grandiflora
Cagra.2315s0003 1.0kb upstream 1.0kb upstream 3211 true Scaffold2315: 9134-12344 Capsella grandiflora
Cagra.2315s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2315: 9134-10133 Capsella grandiflora
Cagra.2315s0003 1.0kb downstream 1.0kb downstream 3211 true Scaffold2315: 10134-13344 Capsella grandiflora
Cagra.2315s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2315: 12345-13344 Capsella grandiflora
Cagra.2315s0003 2.0kb upstream 2.0kb upstream 4211 true Scaffold2315: 8134-12344 Capsella grandiflora
Cagra.2315s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2315: 8134-10133 Capsella grandiflora
Cagra.2315s0003 2.0kb downstream 2.0kb downstream 4211 true Scaffold2315: 10134-14344 Capsella grandiflora
Cagra.2315s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2315: 12345-14344 Capsella grandiflora
Cagra.2315s0003 5.0kb upstream 5.0kb upstream 7211 true Scaffold2315: 5134-12344 Capsella grandiflora
Cagra.2315s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2315: 5134-10133 Capsella grandiflora
Cagra.2315s0003 5.0kb downstream 5.0kb downstream 7211 true Scaffold2315: 10134-17344 Capsella grandiflora
Cagra.2315s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2315: 12345-17344 Capsella grandiflora
Cagra.2315s0003 10.0kb upstream 10.0kb upstream 12211 true Scaffold2315: 134-12344 Capsella grandiflora
Cagra.2315s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold2315: 134-10133 Capsella grandiflora
Cagra.2315s0003 10.0kb downstream 10.0kb downstream 12211 true Scaffold2315: 10134-22344 Capsella grandiflora
Cagra.2315s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2315: 12345-22344 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374905 5261 Brassicaceae View MSA
123830565 5264 Brassicales-Malvales View MSA
124337302 5266 SBM View MSA
124253480 5268 Malvidae View MSA
124060454 5270 Rosid View MSA
123742883 5271 Pentapetalae View MSA
122794375 5272 Eudicot View MSA
122045611 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349882 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain