Gene : Cagra.2315s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11627:SF8 - FRUCTOSE-BISPHOSPHATE ALDOLASE 3, CHLOROPLASTIC-RELATED Genomic Order:  11
Name:  ? Cagra.2315s0011 Secondary Identifier:  ? PAC:28908190
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Sequence Feature Displayer

Ontology Annotation Displayer

10 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ANAEROFRUCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora ANAGLYCOLYSIS-PWY Capsella grandiflora pathologic  
Cgrandiflora CALVIN-PWY Capsella grandiflora pathologic  
Cgrandiflora GLUCONEO-PWY Capsella grandiflora pathologic  
Cgrandiflora PHOTOALL-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-1042 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PWY66-373 Capsella grandiflora pathologic  
Cgrandiflora PWY66-399 Capsella grandiflora pathologic  
Cgrandiflora SUCSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2315s0011 0.5kb upstream 0.5kb upstream 2394 true Scaffold2315: 32921-35314 Capsella grandiflora
Cagra.2315s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold2315: 34815-35314 Capsella grandiflora
Cagra.2315s0011 0.5kb downstream 0.5kb downstream 2394 true Scaffold2315: 32421-34814 Capsella grandiflora
Cagra.2315s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold2315: 32421-32920 Capsella grandiflora
Cagra.2315s0011 1.0kb upstream 1.0kb upstream 2894 true Scaffold2315: 32921-35814 Capsella grandiflora
Cagra.2315s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold2315: 34815-35814 Capsella grandiflora
Cagra.2315s0011 1.0kb downstream 1.0kb downstream 2894 true Scaffold2315: 31921-34814 Capsella grandiflora
Cagra.2315s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold2315: 31921-32920 Capsella grandiflora
Cagra.2315s0011 2.0kb upstream 2.0kb upstream 3894 true Scaffold2315: 32921-36814 Capsella grandiflora
Cagra.2315s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold2315: 34815-36814 Capsella grandiflora
Cagra.2315s0011 2.0kb downstream 2.0kb downstream 3894 true Scaffold2315: 30921-34814 Capsella grandiflora
Cagra.2315s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold2315: 30921-32920 Capsella grandiflora
Cagra.2315s0011 5.0kb upstream 5.0kb upstream 6894 true Scaffold2315: 32921-39814 Capsella grandiflora
Cagra.2315s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold2315: 34815-39814 Capsella grandiflora
Cagra.2315s0011 5.0kb downstream 5.0kb downstream 6894 true Scaffold2315: 27921-34814 Capsella grandiflora
Cagra.2315s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold2315: 27921-32920 Capsella grandiflora
Cagra.2315s0011 10.0kb upstream 10.0kb upstream 11894 true Scaffold2315: 32921-44814 Capsella grandiflora
Cagra.2315s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold2315: 34815-44814 Capsella grandiflora
Cagra.2315s0011 10.0kb downstream 10.0kb downstream 11894 true Scaffold2315: 22921-34814 Capsella grandiflora
Cagra.2315s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold2315: 22921-32920 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373193 5261 Brassicaceae View MSA
123828058 5264 Brassicales-Malvales View MSA
124343223 5266 SBM View MSA
124244605 5268 Malvidae View MSA
124069125 5270 Rosid View MSA
123742159 5271 Pentapetalae View MSA
122788432 5272 Eudicot View MSA
122043152 5273 Angiosperm View MSA
121348633 5274 Embryophyte View MSA
123424623 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain