Gene : Cagra.2515s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10367//PTHR10367:SF11 - MRNA-CAPPING ENZYME Genomic Order:  7
Name:  ? Cagra.2515s0007 Secondary Identifier:  ? PAC:28894435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2515s0007 0.5kb upstream 0.5kb upstream 6463 true Scaffold2515: 23598-30060 Capsella grandiflora
Cagra.2515s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold2515: 29561-30060 Capsella grandiflora
Cagra.2515s0007 0.5kb downstream 0.5kb downstream 6463 true Scaffold2515: 23098-29560 Capsella grandiflora
Cagra.2515s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold2515: 23098-23597 Capsella grandiflora
Cagra.2515s0007 1.0kb upstream 1.0kb upstream 6963 true Scaffold2515: 23598-30560 Capsella grandiflora
Cagra.2515s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold2515: 29561-30560 Capsella grandiflora
Cagra.2515s0007 1.0kb downstream 1.0kb downstream 6963 true Scaffold2515: 22598-29560 Capsella grandiflora
Cagra.2515s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold2515: 22598-23597 Capsella grandiflora
Cagra.2515s0007 2.0kb upstream 2.0kb upstream 7963 true Scaffold2515: 23598-31560 Capsella grandiflora
Cagra.2515s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold2515: 29561-31560 Capsella grandiflora
Cagra.2515s0007 2.0kb downstream 2.0kb downstream 7963 true Scaffold2515: 21598-29560 Capsella grandiflora
Cagra.2515s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold2515: 21598-23597 Capsella grandiflora
Cagra.2515s0007 5.0kb upstream 5.0kb upstream 10963 true Scaffold2515: 23598-34560 Capsella grandiflora
Cagra.2515s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold2515: 29561-34560 Capsella grandiflora
Cagra.2515s0007 5.0kb downstream 5.0kb downstream 10963 true Scaffold2515: 18598-29560 Capsella grandiflora
Cagra.2515s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold2515: 18598-23597 Capsella grandiflora
Cagra.2515s0007 10.0kb upstream 10.0kb upstream 15963 true Scaffold2515: 23598-39560 Capsella grandiflora
Cagra.2515s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold2515: 29561-39560 Capsella grandiflora
Cagra.2515s0007 10.0kb downstream 10.0kb downstream 15963 true Scaffold2515: 13598-29560 Capsella grandiflora
Cagra.2515s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold2515: 13598-23597 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367078 5261 Brassicaceae View MSA
123835353 5264 Brassicales-Malvales View MSA
124342630 5266 SBM View MSA
124249951 5268 Malvidae View MSA
124065683 5270 Rosid View MSA
123738577 5271 Pentapetalae View MSA
122791421 5272 Eudicot View MSA
122046582 5273 Angiosperm View MSA
121350766 5274 Embryophyte View MSA
123427499 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain