Gene : Cagra.2515s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21141:SF3 - 60S ACIDIC RIBOSOMAL PROTEIN P0 Genomic Order:  11
Name:  ? Cagra.2515s0011 Secondary Identifier:  ? PAC:28894415
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2515s0011 0.5kb upstream 0.5kb upstream 2374 true Scaffold2515: 38344-40717 Capsella grandiflora
Cagra.2515s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold2515: 40218-40717 Capsella grandiflora
Cagra.2515s0011 0.5kb downstream 0.5kb downstream 2374 true Scaffold2515: 37844-40217 Capsella grandiflora
Cagra.2515s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold2515: 37844-38343 Capsella grandiflora
Cagra.2515s0011 1.0kb upstream 1.0kb upstream 2874 true Scaffold2515: 38344-41217 Capsella grandiflora
Cagra.2515s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold2515: 40218-41217 Capsella grandiflora
Cagra.2515s0011 1.0kb downstream 1.0kb downstream 2874 true Scaffold2515: 37344-40217 Capsella grandiflora
Cagra.2515s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold2515: 37344-38343 Capsella grandiflora
Cagra.2515s0011 2.0kb upstream 2.0kb upstream 3874 true Scaffold2515: 38344-42217 Capsella grandiflora
Cagra.2515s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold2515: 40218-42217 Capsella grandiflora
Cagra.2515s0011 2.0kb downstream 2.0kb downstream 3874 true Scaffold2515: 36344-40217 Capsella grandiflora
Cagra.2515s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold2515: 36344-38343 Capsella grandiflora
Cagra.2515s0011 5.0kb upstream 5.0kb upstream 6874 true Scaffold2515: 38344-45217 Capsella grandiflora
Cagra.2515s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold2515: 40218-45217 Capsella grandiflora
Cagra.2515s0011 5.0kb downstream 5.0kb downstream 6874 true Scaffold2515: 33344-40217 Capsella grandiflora
Cagra.2515s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold2515: 33344-38343 Capsella grandiflora
Cagra.2515s0011 10.0kb upstream 10.0kb upstream 11874 true Scaffold2515: 38344-50217 Capsella grandiflora
Cagra.2515s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold2515: 40218-50217 Capsella grandiflora
Cagra.2515s0011 10.0kb downstream 10.0kb downstream 11874 true Scaffold2515: 28344-40217 Capsella grandiflora
Cagra.2515s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold2515: 28344-38343 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378301 5261 Brassicaceae View MSA
123836746 5264 Brassicales-Malvales View MSA
124342925 5266 SBM View MSA
124243369 5268 Malvidae View MSA
124061567 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain